{"id":"W3210700444","doi":"10.1128/jcm.01363-21","title":"Multicenter Comparison of Nucleic Acid Amplification Tests for the Diagnosis of Rectal and Oropharyngeal Chlamydia trachomatis and Neisseria gonorrhoeae Infections","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Roche Diagnostics; National Institute of Allergy and Infectious Diseases; Abbott Molecular; BD Biosciences; BD; McGill University; Roche","keywords":"Neisseria gonorrhoeae; Chlamydia trachomatis; Nucleic Acid Amplification Tests; Chlamydia; Gonorrhea; Men who have sex with men; Chlamydiaceae; Lymphogranuloma venereum","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01378676,0.0009803477,0.0006698568,0.001348107,0.0004107111,0.001057189,0.0008802841,0.0007660829,0.0006153435],"category_scores_gemma":[0.02033908,0.0007429325,0.0007707051,0.001068215,0.0006113365,0.0006396062,0.0009578838,0.000720483,0.0003403267],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006069083,"about_ca_system_score_gemma":0.0005346042,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002893604,"about_ca_topic_score_gemma":0.002681296,"domain_scores_codex":[0.9891406,0.006450061,0.0008149412,0.001588448,0.00144962,0.0005563239],"domain_scores_gemma":[0.9862813,0.004757365,0.003472973,0.001370944,0.003210021,0.000907366],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009240939,0.000718816,0.9793829,0.0001129675,0.0008052139,0.00008097546,0.0007023338,0.0002296328,0.00276378,0.00006510571,0.0003200385,0.005577219],"study_design_scores_gemma":[0.000498665,0.008361228,0.9864966,0.00004260104,0.0006825039,0.0002802898,0.0005060082,0.001035165,0.001377983,0.00004049314,0.0006537712,0.00002462427],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983823,0.0004097649,0.0002685199,0.00002104583,0.00002306834,0.0001114082,0.0003290854,0.000008116274,0.0004466745],"genre_scores_gemma":[0.9987318,0.0001106815,0.000376913,0.00004365919,0.00002036351,0.00008626083,0.0005296325,0.000005721889,0.00009497355],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01378676,"threshold_uncertainty_score":0.07291222,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09067700175920766,"score_gpt":0.4331342281354208,"score_spread":0.3424572263762131,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}