{"id":"W3210842525","doi":"10.3389/fmicb.2021.750624","title":"Combinatorial Click Chemistry Labeling to Study Live Human Gut-Derived Microbiota Communities","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"German-Israeli Foundation for Scientific Research and Development; Seerave Foundation; Canadian Institute for Advanced Research; Israel Cancer Research Fund","keywords":"Bacteria; Biology; Anaerobic bacteria; Microbiology; Microbiome; Gut flora; Gut microbiome; Gut bacteria; Enterobacteriaceae; Computational biology; Escherichia coli; Bioinformatics; Biochemistry; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004833641,0.000634175,0.0002988914,0.0003289751,0.0001848269,0.0003170275,0.0002733128,0.0005558573,0.001677742],"category_scores_gemma":[0.0005192682,0.0002245418,0.0002525917,0.000295395,0.0003305934,0.0003222841,0.0004519482,0.0007762738,0.0005443432],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002523065,"about_ca_system_score_gemma":0.0002477496,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004103174,"about_ca_topic_score_gemma":0.001137888,"domain_scores_codex":[0.999679,0.00006712486,0.00001283332,0.0001030877,0.00008660075,0.00005133064],"domain_scores_gemma":[0.9996938,0.0001095314,0.00007319266,0.00002728473,0.00005038168,0.00004587304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006591428,0.00002692174,0.0002245286,0.00007676945,0.00001060663,0.00005162962,0.00002105293,0.0002079446,0.9949356,0.000338245,0.0002192323,0.003821658],"study_design_scores_gemma":[0.00001023613,0.0002331895,0.0007894831,0.000009569792,0.0000163888,0.00014478,0.00001716795,0.002482199,0.9916098,0.0001734473,0.004502335,0.00001129614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6507832,0.005631752,0.3307192,0.000662374,0.0002634091,0.0004508163,0.001648297,0.001247346,0.008593578],"genre_scores_gemma":[0.8343405,0.004403494,0.1507194,0.0006354885,0.00008472885,0.0005585235,0.001762996,0.000201145,0.007293734],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001677742,"threshold_uncertainty_score":0.005612612,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01154163442479011,"score_gpt":0.2687221676952446,"score_spread":0.2571805332704545,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}