{"id":"W3211116066","doi":"10.3390/plants10112355","title":"Grapevine Virology in the Third-Generation Sequencing Era: From Virus Detection to Viral Epitranscriptomics","year":2021,"lang":"en","type":"review","venue":"Plants","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Minion; Nanopore sequencing; DNA sequencing; Biology; Plant virus; Virology; Virus; Computational biology; Biotechnology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004877485,0.0002908438,0.0008302599,0.00004683479,0.000230903,0.0001080469,0.0004600708,0.0002580132,0.00004883712],"category_scores_gemma":[0.0001506543,0.00009622936,0.0001876435,0.0004025723,0.00003116878,0.00007897872,0.00009682437,0.0005573704,0.0001023554],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001320181,"about_ca_system_score_gemma":0.00003557825,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003497083,"about_ca_topic_score_gemma":0.05528865,"domain_scores_codex":[0.9976887,0.0007033134,0.0004053276,0.0004893586,0.0003115859,0.000401715],"domain_scores_gemma":[0.9990057,0.0007047771,0.0001066515,0.00009326931,0.00002692277,0.00006263223],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001045463,0.00002595761,0.000003638527,0.00006551899,0.00005527321,0.00007365993,0.0001215915,0.000001819704,0.1467717,0.000005608515,0.0006782,0.8521866],"study_design_scores_gemma":[0.0000624399,0.0001184992,0.0003627894,0.000808335,0.00007784403,0.00004620913,0.00008574267,0.0000439892,0.001015934,0.00004479157,0.9970269,0.0003065319],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06535634,0.9306458,0.00000572041,0.0001549528,0.0003087617,0.0006286296,0.002795672,0.00003137999,0.00007280678],"genre_scores_gemma":[0.002919282,0.9940946,0.00002034333,0.0003442154,0.0006419797,0.0001567599,0.001798336,0.000001944003,0.00002252299],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9963487,"threshold_uncertainty_score":0.9619499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1547950479605093,"score_gpt":0.3164099257864425,"score_spread":0.1616148778259332,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}