{"id":"W3211166627","doi":"10.1093/plphys/kiab499","title":"Exogenous chalcone synthase expression in developing poplar xylem incorporates naringenin into lignins","year":2021,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Great Lakes Bioenergy Research Center; Biological and Environmental Research; Office of Science; U.S. Department of Energy","keywords":"Xylem; Lignin; Naringenin; Chalcone synthase; Cell wall; Monolignol; Tricin; Flavonoid biosynthesis; Flavonoid; Phenylpropanoid; Chemistry; Cellulase; Botany; Malus; Polyphenol; Biochemistry; Biology; Hydrolysis; Biosynthesis; Enzyme; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000166002,0.0002679619,0.0004054874,0.0001349186,0.0001197079,0.00001886181,0.0002872014,0.0002984992,0.00004939648],"category_scores_gemma":[0.0001486227,0.0002545821,0.0001017279,0.0002349853,0.00005955031,0.000008071158,0.0004467545,0.0001668473,0.00004224832],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000352598,"about_ca_system_score_gemma":0.0002241372,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005632005,"about_ca_topic_score_gemma":0.0004308388,"domain_scores_codex":[0.9980868,0.0002499253,0.0003822469,0.0007327556,0.0001293156,0.0004189276],"domain_scores_gemma":[0.9991299,0.00005358336,0.0001647339,0.0004583394,0.00008181771,0.0001116493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001368214,0.0001085993,0.001213081,0.00003175793,0.00006527534,0.0001961946,0.0001281266,0.0002066376,0.9936338,0.00004593184,0.004014147,0.0002196329],"study_design_scores_gemma":[0.0004675357,0.00006451451,0.001375929,0.00008180529,0.00001557854,0.0001093535,0.0001541292,0.0001605264,0.9848548,0.0002495887,0.01213145,0.0003348321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975777,0.001055922,0.0005045719,0.0002235203,0.000173047,0.0001011369,0.00008902933,0.00002613107,0.000248887],"genre_scores_gemma":[0.9909646,0.0009822721,0.004268284,0.0005602976,0.0001868937,0.00004393313,0.002708553,0.00002809354,0.0002570874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008779038,"threshold_uncertainty_score":0.9999906,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01392725254728514,"score_gpt":0.2401736726791061,"score_spread":0.2262464201318209,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}