{"id":"W3211443823","doi":"10.1016/j.isci.2021.103405","title":"Proteome and strain analysis of cyanobacterium Candidatus “Phormidium alkaliphilum” reveals traits for success in biotechnology","year":2021,"lang":"en","type":"article","venue":"iScience","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; University of Calgary; Alberta Innovates; Canada Foundation for Innovation; United States-Israel Binational Science Foundation; National Science Foundation","keywords":"Cyanobacteria; Photobioreactor; Biology; Proteome; Thermophile; Metagenomics; Strain (injury); Proteomics; Genomics; Genome; Gene; Bacteria; Botany; Computational biology; Biotechnology; Genetics; Biofuel","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009698787,0.0003230414,0.0001550879,0.0003504712,0.0002763955,0.0002451536,0.00014822,0.0002037589,0.0006777223],"category_scores_gemma":[0.0001577837,0.00008000709,0.0001978066,0.0004564519,0.0001047792,0.0002240243,0.0002242352,0.0002833447,0.0001780486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001676475,"about_ca_system_score_gemma":0.0002790502,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003603826,"about_ca_topic_score_gemma":0.003682791,"domain_scores_codex":[0.9999169,0.000006071974,0.000006112499,0.00002330344,0.00002835235,0.00001924707],"domain_scores_gemma":[0.9999279,0.00000750899,0.00001597459,0.000008209926,0.00002460427,0.00001592533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000802676,0.00001261576,0.001484364,0.00003792564,0.000007227419,0.00004306113,0.00002582875,0.00003823546,0.9967617,0.00003344679,0.00008191079,0.00139335],"study_design_scores_gemma":[0.00001091553,0.0002026718,0.3025248,0.00002068382,0.00006922761,0.000683671,0.0004111932,0.001613814,0.6888989,0.0001469309,0.005396804,0.00002035655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932691,0.0005629388,0.0005840497,0.0001233365,0.0000236308,0.00001380302,0.004440659,0.0000264265,0.0009559346],"genre_scores_gemma":[0.9835587,0.0007434467,0.001982428,0.00008294977,0.00001318656,0.00002696976,0.01081575,0.00002040547,0.002756172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003603826,"threshold_uncertainty_score":0.00716567,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01124021183459908,"score_gpt":0.2504761261385872,"score_spread":0.2392359143039881,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}