{"id":"W3211811068","doi":"10.3389/fimmu.2021.786205","title":"Tissue Specific Transcriptome Changes Upon Influenza A Virus Replication in the Duck","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Alberta Innovates; Natural Sciences and Engineering Research Council of Canada; American Lebanese Syrian Associated Charities","keywords":"Biology; Downregulation and upregulation; Virology; Viral replication; Transcriptome; Gene; Influenza A virus; Virus; Influenza A virus subtype H5N1; Interferon; Proinflammatory cytokine; Gene expression; Microbiology; Immunology; Inflammation; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000619621,0.0001543111,0.0003154775,0.000227768,0.0002429248,0.0004055662,0.00008230684,0.0001914689,0.0008343792],"category_scores_gemma":[0.0001125502,0.000119566,0.0002629747,0.0002303986,0.0001703494,0.0001686048,0.0001892177,0.0003401416,0.0002923225],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002851692,"about_ca_system_score_gemma":0.0001559217,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002576686,"about_ca_topic_score_gemma":0.004750357,"domain_scores_codex":[0.9998964,0.000007149599,0.000005498789,0.00004845457,0.00001940788,0.00002303328],"domain_scores_gemma":[0.9999231,0.00001363789,0.00002020448,0.00000579559,0.00002055383,0.00001668857],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003692127,0.00001281546,0.00963454,0.0001047808,0.00002595115,0.0001143545,0.0001532479,0.00008945606,0.9872749,0.00002893343,0.0001380553,0.002053877],"study_design_scores_gemma":[0.000009893072,0.0003843554,0.8994806,0.00003719494,0.00007287467,0.0005426848,0.0009651122,0.001057729,0.09212314,0.00008519813,0.005216986,0.00002403731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933409,0.0008731462,0.0007040896,0.00003456151,0.00002172876,0.00001350542,0.003964258,0.00002538705,0.001022505],"genre_scores_gemma":[0.9876468,0.0006178817,0.001247321,0.000134239,0.00001043883,0.00005958177,0.005738613,0.00002545389,0.00451964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002576686,"threshold_uncertainty_score":0.005123436,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06615460897869645,"score_gpt":0.3549011509245322,"score_spread":0.2887465419458358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}