{"id":"W3212264393","doi":"10.3390/antibiotics10111408","title":"Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient","year":2021,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill Genome Centre; Université Laval","funders":"Canada First Research Excellence Fund; Compute Canada; Université Laval","keywords":"Plasmid; Citrobacter; Transposition (logic); Biology; Mobile genetic elements; Whole genome sequencing; Microbiology; Klebsiella pneumoniae; Genome; Citrobacter freundii; Genetics; Enterobacteriaceae; Gene; Klebsiella oxytoca; Klebsiella; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001387799,0.0004314053,0.000359867,0.0007834041,0.0004153904,0.0003356914,0.0003155849,0.000513908,0.001846177],"category_scores_gemma":[0.0007810869,0.0001973216,0.0004091762,0.001129532,0.0001707892,0.0002115055,0.0002244376,0.0004651343,0.0007161897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005046913,"about_ca_system_score_gemma":0.0009917766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01333101,"about_ca_topic_score_gemma":0.01899919,"domain_scores_codex":[0.9998575,0.00001263282,0.00001754422,0.0000327202,0.0000497968,0.00002971989],"domain_scores_gemma":[0.9994445,0.0001170115,0.0001195606,0.00004468564,0.0001387726,0.0001353032],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001717065,0.0001611016,0.046019,0.0005969399,0.00009177018,0.001900541,0.00114538,0.0005730506,0.9183885,0.0002862972,0.001643684,0.02747671],"study_design_scores_gemma":[0.000114178,0.0008992245,0.8886746,0.00009796734,0.0002970797,0.007277889,0.0008738074,0.0008762294,0.06052684,0.0001825488,0.04012373,0.00005597962],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.949739,0.002171667,0.002174404,0.0002373705,0.0000328442,0.0001453748,0.04339978,0.0000586525,0.002040883],"genre_scores_gemma":[0.7777601,0.001737974,0.01274417,0.0002337778,0.00004799662,0.0002138093,0.2031058,0.00007216837,0.004084133],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01333101,"threshold_uncertainty_score":0.02650678,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01187918083884494,"score_gpt":0.2131974301015301,"score_spread":0.2013182492626852,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}