{"id":"W3212352060","doi":"10.7554/elife.74358","title":"A nanocompartment system contributes to defense against oxidative stress in Mycobacterium tuberculosis","year":2021,"lang":"en","type":"article","venue":"eLife","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; University of California Berkeley","keywords":"Organelle; Oxidative stress; Mycobacterium tuberculosis; Pathogen; Pathogenesis; Bacteria; Oxidative phosphorylation; Function (biology); Mechanism (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005342964,0.0001902918,0.0006939576,0.0001950995,0.00005843759,0.00002552945,0.00009289201,0.0001194921,0.00005863959],"category_scores_gemma":[0.001257708,0.0001623251,0.0001286551,0.0004926004,0.00004330662,0.00004914147,0.0001487646,0.0002549697,0.0003728446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004729494,"about_ca_system_score_gemma":0.000212471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001610251,"about_ca_topic_score_gemma":0.0003837204,"domain_scores_codex":[0.9977171,0.0004099397,0.0004830383,0.0004510703,0.0003067582,0.0006321194],"domain_scores_gemma":[0.9984605,0.0003213508,0.00004905574,0.0004118012,0.0003322286,0.0004250193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001056174,0.001075071,0.714213,0.0007395787,0.0008680934,0.002379879,0.000892785,0.0002519778,0.2176841,0.002658344,0.05551989,0.002661148],"study_design_scores_gemma":[0.004687725,0.0004765228,0.5558599,0.001765401,0.0001157012,0.0001206493,0.003280917,0.0008605304,0.3638451,0.00001544198,0.06854347,0.000428691],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9835308,0.001367428,0.00009678824,0.01067176,0.0002029975,0.0006379669,0.0001080384,0.00007063716,0.003313609],"genre_scores_gemma":[0.9929879,0.0002513967,0.0005009919,0.005404439,0.0001538318,0.0002182059,0.000212361,0.00002035407,0.0002505636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1583531,"threshold_uncertainty_score":0.6619427,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02287009000031158,"score_gpt":0.3096933941866251,"score_spread":0.2868233041863135,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}