{"id":"W3213123536","doi":"10.3390/v13112252","title":"Trans-Activator Binding Site Context in RCNMV Modulates Subgenomic mRNA Transcription","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario","keywords":"Subgenomic mRNA; Transcription (linguistics); RNA; Messenger RNA; Biology; Molecular biology; Capsid; Activator (genetics); Binding site; Cell biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001428256,0.0002082908,0.0002074109,0.0001579243,0.0001867226,0.0003234337,0.0001920049,0.000247489,0.001250255],"category_scores_gemma":[0.0002370761,0.000200733,0.0002226253,0.00009340869,0.0002378778,0.0001547229,0.0001739567,0.0005046192,0.0004764661],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005332527,"about_ca_system_score_gemma":0.0002053305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000854075,"about_ca_topic_score_gemma":0.001799718,"domain_scores_codex":[0.9998375,0.00003907887,0.000007610406,0.00004886952,0.00003763699,0.00002923918],"domain_scores_gemma":[0.9998369,0.0000586459,0.00003915529,0.00001909784,0.00001721228,0.00002893461],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002956786,0.000005118628,0.00009695916,0.00001268059,0.000001046311,0.00001290094,0.00001256477,0.00006533855,0.9993678,0.00007910217,0.00000759411,0.0003093749],"study_design_scores_gemma":[0.000005083303,0.00009612386,0.003337434,0.000005508841,0.000009052847,0.00006831287,0.00003924315,0.002305726,0.9924425,0.00008565829,0.001597775,0.000007599401],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944156,0.0009557342,0.003243258,0.00004247191,0.00002578165,0.00001050033,0.00009471799,0.00007327536,0.001138683],"genre_scores_gemma":[0.9972008,0.0001970682,0.001559769,0.0000314037,0.000006946101,0.000008216571,0.0002211159,0.00002485611,0.0007498498],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001250255,"threshold_uncertainty_score":0.004182577,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07292698474714375,"score_gpt":0.2710897918133217,"score_spread":0.1981628070661779,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}