{"id":"W3213211243","doi":"10.1101/2021.11.07.467636","title":"Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pores in budding yeast","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Nuclear pore; Cell biology; Nucleoplasm; Nuclear transport; Nuclear export signal; Nucleoporin; RNA; Biology; Messenger RNA; Nuclear lamina; RNA-binding protein; Cytoplasm; Nuclear protein; Polyadenylation; Cell nucleus; Chemistry; Nucleolus; Transcription factor; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001108221,0.0002229563,0.0002672544,0.000165929,0.0001872071,0.0005867564,0.0001653667,0.0002021657,0.0005152814],"category_scores_gemma":[0.0001371876,0.0002511011,0.0002060176,0.0001397117,0.0001597365,0.0001877779,0.0003929652,0.0002990519,0.0004138533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004150265,"about_ca_system_score_gemma":0.0001949928,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000993432,"about_ca_topic_score_gemma":0.00106377,"domain_scores_codex":[0.9999214,0.000006055509,0.000007573048,0.00002562955,0.00002345579,0.000015709],"domain_scores_gemma":[0.9998628,0.00002042073,0.0000364182,0.00002353483,0.00001995427,0.0000368359],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004276408,0.000004831872,0.0004165203,0.00001200687,0.000002027259,0.00006464121,0.00001208672,0.0002023365,0.9984978,0.0001832828,0.00003004975,0.0005317345],"study_design_scores_gemma":[0.00001731977,0.0000515251,0.008195489,0.000005142057,0.000007219335,0.0002443163,0.00006007063,0.006056929,0.9834636,0.0002357971,0.001655381,0.000007184581],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949562,0.0001728098,0.003799014,0.00002662911,0.000007050771,0.000008150048,0.0003358859,0.0001306582,0.0005635842],"genre_scores_gemma":[0.9942284,0.0001901326,0.003593084,0.00001807222,0.000002301529,0.00001018335,0.0007757107,0.00007630809,0.001105913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000993432,"threshold_uncertainty_score":0.003011227,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009519401377156652,"score_gpt":0.2315641533143499,"score_spread":0.2220447519371933,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}