{"id":"W3213510606","doi":"10.1371/journal.pgen.1009909","title":"ATRX proximal protein associations boast roles beyond histone deposition","year":2021,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Sinai Health System; Hospital for Sick Children; University of Toronto","funders":"Garron Family Cancer Centre; Natural Sciences and Engineering Research Council of Canada; Cancer Research UK; Canada Foundation for Innovation; Canadian Institutes of Health Research; Ontario Genomics; Cancer Research Society; Genome Canada","keywords":"ATRX; Death-associated protein 6; Biology; Telomere; Histone; Chromatin; Cell biology; Chromatin remodeling; Genetics; DNA repair; Nuclear protein; DNA; Mutation; Transcription factor; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007247763,0.0001483849,0.0001312255,0.00002578701,0.0001141791,0.00003835197,0.0001277391,0.0001898605,0.000032027],"category_scores_gemma":[0.00009017679,0.0001725358,0.00009284254,0.00009633504,0.00003242872,0.00000304179,0.0001431483,0.00009164261,0.00002937447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004576406,"about_ca_system_score_gemma":0.0001555761,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001388979,"about_ca_topic_score_gemma":0.00008231121,"domain_scores_codex":[0.9988653,0.00008255926,0.000210148,0.0003609389,0.0002291171,0.0002519474],"domain_scores_gemma":[0.9992164,0.000004909037,0.0000952073,0.000378565,0.0002188203,0.00008606363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001033695,0.0002064622,0.0005038577,0.00001773094,0.00007442877,0.00001129268,0.00004143011,0.00002857367,0.9978598,0.0001874668,0.0003911824,0.0006674076],"study_design_scores_gemma":[0.0002890447,0.0001775027,0.0004342675,0.00001316877,0.00005675169,0.00001599781,0.00004089047,0.0004828407,0.9958504,0.0004141297,0.002021967,0.0002029798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994294,0.001680843,0.001354898,0.0002712672,0.00009283977,0.0003149993,0.00007403356,0.00003918007,0.001877931],"genre_scores_gemma":[0.9779235,0.00005340199,0.01853334,0.0002456383,0.0003073323,0.0000933322,0.0006080584,0.00004628387,0.002189124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01717844,"threshold_uncertainty_score":0.7035808,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009259306093657738,"score_gpt":0.2361193042744117,"score_spread":0.2268599981807539,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}