{"id":"W3214412162","doi":"10.1182/blood-2021-153441","title":"The Genomic Landscape of Plasmablastic Lymphoma (PBL) - an L.L.M.P.P. Project","year":2021,"lang":"en","type":"article","venue":"Blood","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; Canada's Michael Smith Genome Sciences Centre; University Health Network; Spinal Cord Injury BC","funders":"","keywords":"Exome sequencing; Biology; Lymphoma; HRAS; Exome; Indel; Plasmablastic lymphoma; Comparative genomic hybridization; Genome; Whole genome sequencing; Gene duplication; Fluorescence in situ hybridization; Genetics; Mutation; Gene; KRAS; Immunology; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004497975,0.0002404362,0.0001856597,0.0008188374,0.0003476415,0.0006872467,0.0003172537,0.0002943506,0.003057952],"category_scores_gemma":[0.0005104754,0.0001519036,0.0001971675,0.0007660632,0.0002576534,0.0003302972,0.0008024574,0.000373356,0.0004753841],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004186141,"about_ca_system_score_gemma":0.0004640894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001069717,"about_ca_topic_score_gemma":0.001827331,"domain_scores_codex":[0.9997957,0.00004271514,0.000007495993,0.00007380619,0.00004912259,0.00003111863],"domain_scores_gemma":[0.9997371,0.00005383484,0.00004925673,0.000028154,0.0000487495,0.00008300869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001400124,0.0001547329,0.4229456,0.0006271171,0.0002720491,0.002542926,0.0008619518,0.002840846,0.2395749,0.001837042,0.009224819,0.3177178],"study_design_scores_gemma":[0.00006717988,0.0005394788,0.9095684,0.0001046585,0.0002160893,0.008462618,0.0007262271,0.006085182,0.03314824,0.002948686,0.03810088,0.00003241124],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9786074,0.002261095,0.007801929,0.0016002,0.0000151856,0.00006469322,0.005482162,0.0002750633,0.003892334],"genre_scores_gemma":[0.9802885,0.001386495,0.009104092,0.0004164696,0.00002769818,0.00008098481,0.006233986,0.00005295274,0.00240888],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003057952,"threshold_uncertainty_score":0.01022989,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01087198202763495,"score_gpt":0.2440072968229109,"score_spread":0.2331353147952759,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}