{"id":"W3214856922","doi":"10.1128/jvi.01378-21","title":"Mooring Stone-Like Arg<sup>114</sup>Pulls Diverse Bulged Peptides: First Insight into African Swine Fever Virus-Derived T Cell Epitopes Presented by Swine Major Histocompatibility Complex Class I","year":2021,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Epitope; Major histocompatibility complex; T-cell receptor; African swine fever virus; Cytotoxic T cell; Peptide; T cell; Peptide vaccine; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001314396,0.0001921163,0.0001408688,0.00006131898,0.0001238976,0.0001868932,0.0001808533,0.0002861572,0.0009000667],"category_scores_gemma":[0.00009550794,0.00008289824,0.0001954679,0.00005159658,0.0002137224,0.0001740303,0.0001873992,0.0003477465,0.0001753776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008858892,"about_ca_system_score_gemma":0.0001038114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001296683,"about_ca_topic_score_gemma":0.0002714774,"domain_scores_codex":[0.9999479,0.0000139722,0.000002820631,0.000008872375,0.000009363619,0.00001702395],"domain_scores_gemma":[0.9999614,0.000007063266,0.00001040003,0.000004300933,0.000003468741,0.00001347441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002578223,0.00003734553,0.00137535,0.00004152735,0.000009244918,0.0002837436,0.00003042512,0.0003052075,0.9946375,0.00025379,0.00005639292,0.002711641],"study_design_scores_gemma":[0.00005777233,0.002290858,0.01230702,0.00001390375,0.00004474273,0.001841574,0.0001941979,0.004883498,0.9744719,0.0002759704,0.003599472,0.00001903208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997896,0.0001699208,0.001415018,0.00004042282,0.00001297723,0.00001511346,0.00002137634,0.000007078655,0.0004220661],"genre_scores_gemma":[0.9971935,0.0001388932,0.001911169,0.00005496279,0.000005252202,0.000007456367,0.00006345229,0.000004966978,0.0006204236],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009000667,"threshold_uncertainty_score":0.003010988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03059841112838122,"score_gpt":0.2443726540517168,"score_spread":0.2137742429233356,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}