{"id":"W3215214143","doi":"10.3389/fpls.2021.751866","title":"Global Transcriptome and Coexpression Network Analyses Reveal New Insights Into Somatic Embryogenesis in Hybrid Sweetgum (Liquidambar styraciflua × Liquidambar formosana)","year":2021,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Fundamental Research Funds for the Central Universities; National Forestry and Grassland Administration","keywords":"Biology; Somatic embryogenesis; Transcriptome; Transcription factor; Gene; Cell biology; Genetics; Auxin; Callus; Somatic cell; Gene expression; Embryogenesis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002542114,0.0001959375,0.0002743085,0.00009972605,0.0001646136,0.00007223523,0.0002749921,0.0001264002,0.000002605425],"category_scores_gemma":[0.0000685437,0.0001663259,0.00004654935,0.0006258366,0.0001900663,0.00004642351,0.0001039042,0.00008158572,0.000001014169],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007176619,"about_ca_system_score_gemma":0.0005069168,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001999202,"about_ca_topic_score_gemma":0.001690582,"domain_scores_codex":[0.9983345,0.00009229193,0.0003120425,0.0005967488,0.0002739294,0.0003904548],"domain_scores_gemma":[0.9994451,0.000006656079,0.00007771014,0.0002430151,0.00004875831,0.0001787454],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009206449,0.00003919196,0.01475095,0.00003051701,0.00001822427,0.0001015044,0.0003354464,0.001830105,0.9627656,0.00003624601,0.01884752,0.001152659],"study_design_scores_gemma":[0.001252141,0.0002470755,0.0242829,0.0003345481,0.00005648261,0.0002355546,0.0006305547,0.007437938,0.9497958,0.0007896544,0.01426594,0.0006713679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9657333,0.021978,0.01118587,0.0001772478,0.0005832027,0.0001559728,0.00002707522,0.00001041744,0.0001488989],"genre_scores_gemma":[0.9897293,0.001539977,0.007682138,0.0001944637,0.0001765817,0.000009980192,0.0002445505,0.000007692135,0.0004153604],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02399594,"threshold_uncertainty_score":0.6782574,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01337938725301157,"score_gpt":0.267413537451219,"score_spread":0.2540341501982075,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}