{"id":"W3215573638","doi":"10.3390/ijms222212561","title":"Putative RNA Ligase RtcB Affects the Switch between T6SS and T3SS in Pseudomonas aeruginosa","year":2021,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pseudomonas aeruginosa; Microbiology; Virulence; Biofilm; Biology; Type VI secretion system; Escherichia coli; Type three secretion system; Secretion; RNA; Motility; Bacteria; Cell biology; Biochemistry; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001593153,0.000476031,0.0003580593,0.0001726298,0.0001569017,0.0002656712,0.0002312161,0.0004354827,0.001338413],"category_scores_gemma":[0.0002021923,0.0001853042,0.0005032523,0.0001503744,0.0002973634,0.0001470576,0.0002297872,0.0005357443,0.0005493783],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004920588,"about_ca_system_score_gemma":0.0002694103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002192731,"about_ca_topic_score_gemma":0.001490699,"domain_scores_codex":[0.9997708,0.00005188236,0.00002835253,0.00004671303,0.00006420083,0.0000379523],"domain_scores_gemma":[0.999832,0.000040203,0.0000579585,0.00001408644,0.00001516977,0.00004062553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006203816,0.00001645021,0.0001034454,0.00001455843,0.000003439992,0.00007735204,0.000005499477,0.00003819761,0.9993913,0.00002706948,0.00001018796,0.0002503428],"study_design_scores_gemma":[0.00002335914,0.0002251105,0.005421629,0.000007133504,0.00001824372,0.0003895172,0.00003449914,0.001474709,0.9914311,0.00004526392,0.0009169109,0.00001263775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963447,0.000547167,0.002028381,0.0001064341,0.0000321081,0.00002480542,0.0003534431,0.00008662586,0.0004764529],"genre_scores_gemma":[0.9970493,0.0002020054,0.001257758,0.00006760664,0.000006432655,0.00001761969,0.0003520407,0.00003734305,0.001009765],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002192731,"threshold_uncertainty_score":0.004477441,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01215924856281671,"score_gpt":0.2811182701490941,"score_spread":0.2689590215862774,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}