{"id":"W3215795909","doi":"10.52586/5014","title":"Genome-wide comparative analysis of transposable elements in Palmae genomes","year":2021,"lang":"en","type":"article","venue":"Frontiers in Bioscience-Landmark","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Transposable element; Genome; Retrotransposon; Biology; Genetics; Genome evolution; Genome size; Evolutionary biology; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002676699,0.0001175587,0.000388253,0.0001152776,0.0000888166,0.00002954484,0.0002824612,0.00006154245,0.000429747],"category_scores_gemma":[0.00002796072,0.00005653219,0.0001181955,0.003929514,0.0001075839,0.00008639616,0.00004362227,0.00007657801,0.000002821444],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005387542,"about_ca_system_score_gemma":0.00003376175,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009789555,"about_ca_topic_score_gemma":0.006473913,"domain_scores_codex":[0.9985765,0.0001027067,0.0003967724,0.0003767242,0.0002375007,0.0003098404],"domain_scores_gemma":[0.9996139,0.00008574572,0.00009476264,0.00007852819,0.00005584283,0.00007126685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001331781,0.0001484636,0.9763868,0.000002962804,0.00005308499,0.000006155417,0.000565272,0.000343885,0.02098317,0.00002657839,0.00005824754,0.001412086],"study_design_scores_gemma":[0.000218369,0.00005854921,0.988203,0.00000984891,0.00005111267,4.181669e-7,0.001347129,0.002888664,0.00175081,0.0003909745,0.00494446,0.0001366806],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966162,0.0007932155,0.00005257935,0.0003562841,0.0001819065,0.0001358276,0.00014125,0.00000776015,0.001714997],"genre_scores_gemma":[0.9969567,0.000294064,0.0022204,0.00008633087,0.00002033604,0.00001206303,0.0001614307,3.944998e-7,0.0002482804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01923236,"threshold_uncertainty_score":0.4705428,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01978892610028356,"score_gpt":0.2321347561598006,"score_spread":0.212345830059517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}