{"id":"W3216406333","doi":"10.1016/j.virol.2021.11.013","title":"Pathogenesis and host responses in lungs and kidneys following Canadian 4/91 infectious bronchitis virus (IBV) infection in chickens","year":2021,"lang":"en","type":"article","venue":"Virology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; University of Guelph; University of Calgary","funders":"Egg Farmers of Canada; Agriculture and Agri-Food Canada; Canadian Poultry Research Council","keywords":"Biology; Infectious bronchitis virus; Pathogenesis; Virology; Avian infectious bronchitis virus; Virus; Immune system; Pathogen; Lung; Flock; Immunology; Kidney; Proinflammatory cytokine; Host (biology); Specific-pathogen-free; Inflammation; Pathology; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002209527,0.0001363552,0.0002336374,0.00009824768,0.0002692763,0.00003415922,0.00003507067,0.0001729241,0.00007129215],"category_scores_gemma":[0.0003746341,0.00007827938,0.00004123531,0.0004910183,0.0001223243,0.000093794,0.00008966603,0.0001667365,0.000009406051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008511118,"about_ca_system_score_gemma":0.00003722496,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3288771,"about_ca_topic_score_gemma":0.9633135,"domain_scores_codex":[0.9988174,0.0002578792,0.0001848448,0.0003522554,0.00005417823,0.0003334514],"domain_scores_gemma":[0.9995458,0.0002406087,0.00003481529,0.00004091487,0.00002130364,0.0001166153],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001667745,0.00002898002,0.8526206,0.000002947286,0.00001107227,0.0001333083,0.0001246771,9.928639e-7,0.1424362,0.0001125286,0.00002863151,0.004483383],"study_design_scores_gemma":[0.0002194858,0.0002161343,0.9946153,0.00001142997,0.00001149651,0.0001267841,0.00008705223,0.00001225885,0.0005291592,0.0001919606,0.003834058,0.0001449266],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969932,0.0008829867,0.000001026904,0.001074745,0.0001556782,0.0001180934,0.00003708352,0.00003108259,0.0007061343],"genre_scores_gemma":[0.997748,0.001391639,0.00001454954,0.00068762,0.00005827998,0.00003048259,0.000008558236,0.000001699345,0.0000592016],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6344364,"threshold_uncertainty_score":0.675592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01208731958920279,"score_gpt":0.2192309803099213,"score_spread":0.2071436607207185,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}