{"id":"W3217233642","doi":"10.3389/fpls.2021.766389","title":"Centromere-Specific Retrotransposons and Very-Long-Chain Fatty Acid Biosynthesis in the Genome of Yellowhorn (Xanthoceras sorbifolium, Sapindaceae), an Oil-Producing Tree With Significant Drought Resistance","year":2021,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Université Laval","funders":"Fundamental Research Funds for the Central Universities; Beijing Forestry University; National Forestry and Grassland Administration; National Natural Science Foundation of China","keywords":"Retrotransposon; Genome; Biology; Genetics; Genome evolution; Centromere; Gene; Contig; Genome project; Segmental duplication; GC-content; Sequence assembly; Reference genome; Gene family; Chromosome; Transposable element; Transcriptome; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001134446,0.0001904475,0.000140512,0.0003055315,0.0001386599,0.0002314411,0.00009992279,0.0001605414,0.0004617236],"category_scores_gemma":[0.000157794,0.000144484,0.0002988162,0.0003821957,0.0001166951,0.0001744467,0.0002387747,0.0002564912,0.0001839273],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001834122,"about_ca_system_score_gemma":0.0001609385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001417185,"about_ca_topic_score_gemma":0.003369994,"domain_scores_codex":[0.9999179,0.000006807498,0.000005696498,0.00004227869,0.00001629788,0.00001104801],"domain_scores_gemma":[0.999902,0.00001935845,0.0000357659,0.00001217838,0.0000164732,0.00001426981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005375227,0.00000490888,0.004361675,0.00004346844,0.000007817312,0.00004315374,0.00007399062,0.000136961,0.9922972,0.00004347756,0.000009717479,0.002923877],"study_design_scores_gemma":[0.00002889342,0.0003433203,0.6121359,0.00005880669,0.0001670701,0.0008447084,0.0003763696,0.00612269,0.3730029,0.0003372339,0.006559554,0.00002257314],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956495,0.0004753385,0.002816702,0.00001578552,0.000002747406,0.00001072012,0.0006521342,0.00004616698,0.0003308958],"genre_scores_gemma":[0.9871162,0.0003457213,0.006856087,0.00003295437,0.000002917354,0.00001959048,0.004256003,0.0000442746,0.001326217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001417185,"threshold_uncertainty_score":0.00281781,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0132028860907712,"score_gpt":0.1899122363228649,"score_spread":0.1767093502320937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}