{"id":"W35071854","doi":"10.1021/acsomega.1c06067","title":"Characterization of a native plasmid from Bacillus subtilis with special focus on its regulatory circuit for conjugation","year":2014,"lang":"en","type":"dissertation","venue":"","topic":"Microbial Fuel Cells and Bioremediation","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Government of Saskatchewan; National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Saskatchewan","keywords":"Bacillus subtilis; Horizontal gene transfer; Plasmid; Bacteria; Bacterial conjugation; Biology; Gene; Genome; Gene transfer; Genetics; Computational biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001445379,0.0003303177,0.0002670183,0.0003090886,0.0001262854,0.0002867849,0.000181732,0.0002885022,0.0009495953],"category_scores_gemma":[0.0004607199,0.0001067709,0.0002368187,0.0004313946,0.0001272263,0.0001929197,0.0001472467,0.0004799794,0.0005656597],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001034683,"about_ca_system_score_gemma":0.0002470382,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008868725,"about_ca_topic_score_gemma":0.0007541933,"domain_scores_codex":[0.9998547,0.00001742618,0.00001258051,0.00002586187,0.00006489755,0.00002450506],"domain_scores_gemma":[0.9997459,0.00008554443,0.0000447256,0.00002843748,0.00005479586,0.00004055255],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002010247,0.00002453673,0.0002876333,0.00002057008,0.000001781639,0.00002504698,0.00001413458,0.0000311991,0.9978689,0.0000238197,0.0000207164,0.001661493],"study_design_scores_gemma":[0.000005316429,0.0002670109,0.009030862,0.000006872056,0.00001482879,0.0003221685,0.00006289544,0.0005307757,0.9871196,0.00004016469,0.002591402,0.000008182441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9817956,0.0006351616,0.01347647,0.0001990986,0.00003349022,0.00007716209,0.001967726,0.0001817543,0.001633564],"genre_scores_gemma":[0.9710076,0.0006373014,0.01446419,0.00007893429,0.000008242833,0.0000742759,0.008364663,0.0001244335,0.005240431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009495953,"threshold_uncertainty_score":0.003176689,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0109206720922072,"score_gpt":0.1991536317347099,"score_spread":0.1882329596425027,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}