{"id":"W381882559","doi":"10.7717/peerj.968","title":"Back from the dead; the curious tale of the predatory cyanobacterium <i>Vampirovibrio chlorellavorus</i>","year":2015,"lang":"en","type":"article","venue":"PeerJ","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Obligate; Cyanobacteria; Metagenomics; Lineage (genetic); 16S ribosomal RNA; Genome; Methylobacterium; Agrobacterium tumefaciens; Phototroph; Predator; Photosynthesis; Botany; Bacteria; Evolutionary biology; Zoology; Ecology; Gene; Genetics; Predation; Transformation (genetics)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003531073,0.0001103706,0.0001356702,0.000003472555,0.0002528995,0.00001356647,0.001177531,0.00008719481,0.004315172],"category_scores_gemma":[0.00007173113,0.00005308793,0.00008111561,0.000105212,0.0008666198,0.000061475,0.0008789522,0.0003102906,0.001363139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004372159,"about_ca_system_score_gemma":0.00003362409,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003221741,"about_ca_topic_score_gemma":0.005313988,"domain_scores_codex":[0.9989318,0.0004210901,0.0001632335,0.0001505288,0.0001312063,0.000202178],"domain_scores_gemma":[0.9986693,0.0002827288,0.0001190934,0.0008720185,0.00001200581,0.00004484293],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001294419,0.0002117744,0.1794106,0.000007284397,0.00006604585,0.000001232052,0.009750699,0.0007641127,0.1879521,0.0001990027,0.6208261,0.0006816384],"study_design_scores_gemma":[0.0003240807,0.00006687967,0.3299743,0.000006601043,0.00002847125,0.000008101734,0.0002893734,0.00005829734,0.01032647,0.002779689,0.6560095,0.0001282821],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9802206,0.00009389443,0.00000633183,0.003330598,0.0004337178,0.0002116875,0.00006777851,0.000009315278,0.0156261],"genre_scores_gemma":[0.9943087,0.00001380691,0.00002912525,0.003354633,0.00007983125,0.000006640479,0.00002146062,0.000009174462,0.002176678],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1776256,"threshold_uncertainty_score":0.9994144,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01728603629730049,"score_gpt":0.2127186672933731,"score_spread":0.1954326309960726,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}