{"id":"W4200031717","doi":"10.15698/mic2022.01.767","title":"Detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its first variants in fourplex real-time quantitative reverse transcription-PCR assays","year":2021,"lang":"en","type":"article","venue":"Microbial Cell","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"","keywords":"TaqMan; Biology; Virology; Primer (cosmetics); Coronavirus; Reverse transcription polymerase chain reaction; Reverse transcriptase; Real-time polymerase chain reaction; Molecular biology; RNA; Coronaviridae; Gene; Genetics; Coronavirus disease 2019 (COVID-19); Gene expression; Chemistry; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003017023,0.001838999,0.001306555,0.001040901,0.0003135151,0.001108864,0.00098623,0.001211258,0.002295034],"category_scores_gemma":[0.002220396,0.0009577779,0.0006910132,0.00066231,0.000891689,0.0007023457,0.0006821992,0.001729458,0.001601014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005666874,"about_ca_system_score_gemma":0.0004732291,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001730327,"about_ca_topic_score_gemma":0.0004143068,"domain_scores_codex":[0.9952801,0.001216023,0.0003839685,0.001540837,0.001197097,0.0003819827],"domain_scores_gemma":[0.9984427,0.0008685173,0.0002106105,0.0001411858,0.0002541713,0.00008292391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002123186,0.0001046039,0.001029296,0.00009852973,0.00001478667,0.00002730845,0.0001157344,0.0002417927,0.9945086,0.0001177566,0.00006792191,0.003461366],"study_design_scores_gemma":[0.00006751407,0.001434011,0.00357559,0.00003328987,0.00007033232,0.0003046964,0.00007715924,0.007525133,0.9832501,0.0002312323,0.003393084,0.00003778041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7123468,0.002426107,0.2783193,0.0002370324,0.0004617083,0.0009529098,0.001725974,0.001491338,0.002038805],"genre_scores_gemma":[0.4583074,0.001955425,0.5162695,0.0006006954,0.0002082924,0.00423505,0.007085368,0.0002579106,0.01108027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003017023,"threshold_uncertainty_score":0.01595575,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05119831137891897,"score_gpt":0.2942572245994902,"score_spread":0.2430589132205712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}