{"id":"W4200042892","doi":"10.1002/ggn2.202100022","title":"Transposable Element Populations Shed Light on the Evolutionary History of Wheat and the Complex Co‐Evolution of Autonomous and Non‐Autonomous Retrotransposons","year":2021,"lang":"en","type":"article","venue":"Advanced Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Universität Zürich","keywords":"Retrotransposon; Biology; Genome; Transposable element; Haplotype; Evolutionary biology; Population; Genetics; Genome evolution; Phylogenetic tree; Genetic diversity; Allele; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004901493,0.0001945731,0.000228661,0.000672193,0.0002833933,0.0008931116,0.0002603388,0.0004418148,0.001005857],"category_scores_gemma":[0.0005612992,0.0001398511,0.0001564857,0.001184814,0.0006816149,0.001184495,0.0005414619,0.0006451541,0.0001906315],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005041454,"about_ca_system_score_gemma":0.0002172468,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001223162,"about_ca_topic_score_gemma":0.001721925,"domain_scores_codex":[0.9997734,0.0000339446,0.00001476391,0.0001130073,0.00004327534,0.00002159503],"domain_scores_gemma":[0.9997627,0.00007459351,0.00005869739,0.00002415524,0.00004796437,0.00003182332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003038514,0.00008439813,0.1043133,0.0007698354,0.0001495366,0.001229624,0.002109533,0.002709692,0.5684161,0.03687101,0.0006276619,0.2824156],"study_design_scores_gemma":[0.0000438938,0.000589464,0.7836455,0.0002049374,0.0002160666,0.002898893,0.002168617,0.008525076,0.04777542,0.03944471,0.1143662,0.0001212881],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9478688,0.02140175,0.01949362,0.0008615635,0.00009090327,0.00003477555,0.000665679,0.00006387821,0.009519162],"genre_scores_gemma":[0.979591,0.010528,0.006071531,0.0002621771,0.0001003242,0.00001615521,0.000477284,0.00002402154,0.002929607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001223162,"threshold_uncertainty_score":0.003657877,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02210754415435971,"score_gpt":0.2212238656865331,"score_spread":0.1991163215321734,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}