{"id":"W4200064145","doi":"10.21203/rs.3.rs-1176760/v1","title":"Whole-Genome Sequencing of a Year-Round Fruiting Jackfruit Variety Reveals Very High Single Nucleotide Polymorphisms in Inter-Genic Regions","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; University of British Columbia; University of Saskatchewan","funders":"Bangabandhu Sheikh Mujibur Rahman Agricultural University","keywords":"Biology; Genome; Phylogenetic tree; Genome size; Whole genome sequencing; Artocarpus; Sequence assembly; Horticulture; Botany; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001337969,0.0003114705,0.0002386714,0.0004210897,0.0003609009,0.0002901185,0.0002116513,0.0002695123,0.0008136352],"category_scores_gemma":[0.0002008998,0.0001268629,0.0005117165,0.0005750591,0.0001141754,0.0001084558,0.000194192,0.0002908799,0.0003013446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002700501,"about_ca_system_score_gemma":0.000239269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009710031,"about_ca_topic_score_gemma":0.02603262,"domain_scores_codex":[0.9998739,0.000009561424,0.000009923892,0.00005636774,0.00002986385,0.00002036684],"domain_scores_gemma":[0.9998628,0.00002769917,0.00003690717,0.00001396535,0.00003209393,0.00002652431],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002221388,0.00004111906,0.01985005,0.0001014252,0.00006847275,0.0004863131,0.0002643542,0.0002178522,0.9712934,0.00005637273,0.00026255,0.007135889],"study_design_scores_gemma":[0.00002117184,0.0003103416,0.9357614,0.00002755633,0.0002320783,0.001564731,0.0004741303,0.002076981,0.05008596,0.00006083728,0.009348309,0.0000365546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915676,0.0002824408,0.001829946,0.00003028433,0.00001019002,0.00003493286,0.005472739,0.0000704934,0.0007013642],"genre_scores_gemma":[0.9760177,0.000161455,0.005242185,0.0000545653,0.000005013776,0.00004654452,0.0165295,0.00004722918,0.001895859],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009710031,"threshold_uncertainty_score":0.01930708,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06466070200985302,"score_gpt":0.3213028876644727,"score_spread":0.2566421856546197,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}