{"id":"W4200169654","doi":"10.1016/j.fsirep.2021.100043","title":"Innate response of rainbow trout gill epithelial (RTgill-W1) cell line to ultraviolet-inactivated VHSV and FliC and rhabdovirus infection","year":2021,"lang":"en","type":"article","venue":"Fish and Shellfish Immunology Reports","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Huntsman Marine Science Centre","funders":"Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Biology; Innate immune system; Flagellin; Virology; Edwardsiella tarda; Microbiology; Virus; IRF7; Cell culture; TLR5; Carp; Infectious hematopoietic necrosis virus; Immune system; IRF3; Gene; TLR2; Rainbow trout; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004780042,0.0003455739,0.0006099095,0.0002541896,0.0002621992,0.00003772103,0.00007999769,0.0005016103,0.0001522929],"category_scores_gemma":[0.000385587,0.0003273106,0.0000910929,0.0002787819,0.0004404114,0.0001397399,0.0003112726,0.0003671615,0.00001542278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000295489,"about_ca_system_score_gemma":0.00007678362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001869825,"about_ca_topic_score_gemma":0.00005763261,"domain_scores_codex":[0.9977854,0.0003587742,0.000625364,0.0007328091,0.00004339497,0.0004542546],"domain_scores_gemma":[0.9988481,0.0001425993,0.0003276023,0.0004214835,0.0001948789,0.00006538284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001419663,0.0002090236,0.01377431,0.0000641607,0.0003182748,0.0003385307,0.000526904,0.000001830695,0.9762418,0.00003558094,0.003292063,0.003777912],"study_design_scores_gemma":[0.002456466,0.0005892039,0.2539384,0.00008212878,0.0002196999,0.001638146,0.0003995418,0.000001561202,0.6204872,0.0001249319,0.1195825,0.0004801877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946378,0.002571929,0.000045668,0.0009271267,0.0006092254,0.0004026591,0.00009868384,0.00008068411,0.0006262261],"genre_scores_gemma":[0.9927557,0.001220052,0.00005475216,0.001138496,0.00003000928,0.00002468332,0.0003244522,0.00002886515,0.004423027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3557546,"threshold_uncertainty_score":0.9999179,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005740037211860946,"score_gpt":0.2118227960837581,"score_spread":0.2060827588718971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}