{"id":"W4200173761","doi":"10.1016/j.archoralbio.2021.105337","title":"Detection of Fusobacterium nucleatum subspecies in the saliva of pre-colorectal cancer patients, using tandem mass spectrometry","year":2021,"lang":"en","type":"article","venue":"Archives of Oral Biology","topic":"Otolaryngology and Infectious Diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Concordia University; McGill University Health Centre; Concordia University of Edmonton; McGill University","funders":"McGill University","keywords":"Fusobacterium nucleatum; Saliva; Subspecies; Tandem mass spectrometry; Microbiology; Mass spectrometry; Chemistry; Medicine; Biology; Bacteria; Chromatography; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005672207,0.00007946313,0.0003008839,0.0001287048,0.00002198063,0.000001157199,0.00006496001,0.00006842164,0.00008723178],"category_scores_gemma":[0.0001240911,0.00005721679,0.00009689783,0.0001994211,0.0003584904,0.00002943563,0.00003603666,0.0001199589,3.065159e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000168394,"about_ca_system_score_gemma":0.00007382558,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002597843,"about_ca_topic_score_gemma":0.0001897486,"domain_scores_codex":[0.9992397,0.0001891578,0.0002481512,0.0001347183,0.00005070702,0.0001375496],"domain_scores_gemma":[0.9995323,0.0001447226,0.0001451667,0.0001112668,0.00004586066,0.00002070743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002012951,0.0001798186,0.5270035,0.00003941769,0.00004714615,0.000001669567,0.0002417096,0.000001194534,0.471737,0.0001097319,0.000002125027,0.0004353816],"study_design_scores_gemma":[0.0005336642,0.0007362315,0.7553021,0.00003403586,0.00005275674,0.00001029198,0.0001065935,0.00003050894,0.2426274,0.0005004304,0.00002973514,0.00003631149],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984773,0.0004025546,0.00005340839,0.00006156209,0.000147193,0.0001455754,0.00004136468,0.000006115866,0.0006649609],"genre_scores_gemma":[0.9993895,0.0001905016,0.000297329,0.00004557574,0.00003073521,0.000004463163,0.00002761711,0.00000585307,0.000008424993],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2291097,"threshold_uncertainty_score":0.2333233,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01219157335634767,"score_gpt":0.2717687551340714,"score_spread":0.2595771817777238,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}