{"id":"W4200204816","doi":"10.1111/mpp.13158","title":"Genotyping by sequencing suggests overwintering of <i>Peronospora destructor</i> in southwestern Québec, Canada","year":2021,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency; McGill University; L'Alliance Boviteq; Phytodata","funders":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","keywords":"Biology; Downy mildew; Overwintering; Population; Linkage disequilibrium; Analysis of molecular variance; Destructor; Genetic structure; Ecology; Genetic variation; Genetics; Botany; Genotype; Haplotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009283416,0.0001310721,0.0002505483,0.000009680203,0.00004424455,0.00001131639,0.0001519525,0.00008857064,0.00004550483],"category_scores_gemma":[0.00002992146,0.00006819787,0.00004608536,0.0001400487,0.00003281162,0.00002779497,0.00006746133,0.0001169763,0.000001294342],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009847955,"about_ca_system_score_gemma":0.0001682782,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2046956,"about_ca_topic_score_gemma":0.927581,"domain_scores_codex":[0.9989114,0.0001025694,0.000263821,0.0003011199,0.0001272879,0.0002937629],"domain_scores_gemma":[0.9996747,0.00006747582,0.00009591333,0.00006984834,0.0000316351,0.00006040871],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001170821,0.00001184679,0.01128222,0.00001240775,0.000005667754,0.003513728,0.00003025613,0.00003928604,0.9842811,0.00002627193,0.0000778696,0.0007076544],"study_design_scores_gemma":[0.0002351561,0.00006185598,0.1373483,0.000130489,0.00001318414,0.001051215,0.0004470123,0.00007084392,0.8571329,0.00002453649,0.003113368,0.0003711435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970592,0.00172675,0.00002588705,0.0001853003,0.0001013956,0.00005436864,0.0006674377,0.00001186189,0.0001678031],"genre_scores_gemma":[0.9992029,0.00004817926,0.00009200435,0.0003389924,0.00001738119,0.000003140628,0.0002480834,0.000001546285,0.00004777806],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7228854,"threshold_uncertainty_score":0.8006004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007254445999218288,"score_gpt":0.168505424497091,"score_spread":0.1612509784978727,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}