{"id":"W4200226752","doi":"10.1101/2021.12.10.21267625","title":"Germline Allelic Expression of Genes at 17q22 Locus Associates with Risk of Breast Cancer","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"NIHR Cambridge Biomedical Research Centre; BC Cancer Agency; Fundação para a Ciência e a Tecnologia; Centro de Investigação em Biomedicina; Medical Research Council; National Institute for Health and Care Research; University of Cambridge; Cancer Research UK","keywords":"Allele; Breast cancer; Locus (genetics); Gene; Biology; Genome-wide association study; Genetics; Germline; Genetic association; Case-control study; microRNA; Phenotype; Cancer; Oncology; Internal medicine; Genotype; Single-nucleotide polymorphism; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006112928,0.0003431981,0.0002707026,0.0008288583,0.0001153485,0.000398129,0.0001867079,0.0003448889,0.004737563],"category_scores_gemma":[0.001549046,0.000178679,0.0002856274,0.0007065237,0.0002508914,0.0001037509,0.0003142806,0.0003025234,0.0003795119],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008037782,"about_ca_system_score_gemma":0.0001015025,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004696995,"about_ca_topic_score_gemma":0.0004945321,"domain_scores_codex":[0.9996044,0.0001280119,0.00002274583,0.0001103203,0.00009439022,0.00004018679],"domain_scores_gemma":[0.9993942,0.0002753319,0.0001757018,0.0000921725,0.0000226835,0.00003998634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001024815,0.00008622183,0.7781802,0.000151095,0.0008945594,0.001426785,0.000223922,0.0015046,0.1799459,0.001464248,0.001409454,0.03368805],"study_design_scores_gemma":[0.0001468638,0.0002162197,0.9569765,0.00002907256,0.0003998374,0.003618325,0.0001513157,0.005008345,0.02609435,0.003027412,0.004312453,0.00001934055],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992784,0.000469771,0.004355811,0.000195395,0.00003210679,0.000007738052,0.00121209,0.0001291199,0.0008139802],"genre_scores_gemma":[0.9954639,0.00023737,0.002398419,0.00005540447,0.00003440112,0.00001669993,0.0009354589,0.00005232365,0.0008060373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004737563,"threshold_uncertainty_score":0.0158487,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005220199728924057,"score_gpt":0.2221386475355377,"score_spread":0.2169184478066136,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}