{"id":"W4200283906","doi":"10.1101/2021.12.27.474283","title":"Chloroplast-localized translation for protein targeting in <i>Chlamydomonas reinhardtii</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Concordia University","funders":"Concordia University; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Chlamydomonas reinhardtii; Chlamydomonas; Ribosome; Chloroplast; Translation (biology); Cell biology; Biology; Protein biosynthesis; Eukaryotic Ribosome; Ribosome profiling; Biochemistry; Messenger RNA; RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003173838,0.000245102,0.0002383001,0.0002033599,0.000383345,0.0003099213,0.0002383264,0.0003134637,0.001307847],"category_scores_gemma":[0.0002637272,0.0001670956,0.0002750745,0.0001669481,0.0001738194,0.0001285762,0.0003085989,0.0005355197,0.0006186828],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001086804,"about_ca_system_score_gemma":0.0006442164,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007412204,"about_ca_topic_score_gemma":0.008949426,"domain_scores_codex":[0.9998522,0.00001245422,0.00001021892,0.0000383318,0.00005280087,0.00003394977],"domain_scores_gemma":[0.9998844,0.00002755375,0.00001813298,0.00002424494,0.00002464253,0.00002098847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002976107,0.000008994529,0.0002580613,0.00002156852,0.000002093638,0.00006693496,0.0000244821,0.00004967926,0.9985254,0.0001837897,0.0001528413,0.0006762548],"study_design_scores_gemma":[0.00002227165,0.00008892022,0.02864719,0.00001903034,0.00001592585,0.0002405067,0.0001128141,0.001934827,0.9598345,0.0002101395,0.008858833,0.00001502373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914461,0.0008775414,0.003513356,0.0002533635,0.0001192838,0.00003733207,0.000751745,0.0001743638,0.00282684],"genre_scores_gemma":[0.9842478,0.0003869386,0.004028409,0.00008630969,0.00001311295,0.00002984459,0.002327723,0.0001244561,0.008755428],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007412204,"threshold_uncertainty_score":0.01473808,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0112187882903168,"score_gpt":0.2208824697071901,"score_spread":0.2096636814168732,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}