{"id":"W4200308095","doi":"10.1186/s12862-021-01945-z","title":"The gut microbiome as an indicator of habitat disturbance in a Critically Endangered lemur","year":2021,"lang":"en","type":"article","venue":"BMC Ecology and Evolution","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Quest High Performance Computing; Northwestern University; Leakey Foundation","keywords":"Biology; Habitat; Ecology; Disturbance (geology); Endangered species; Species richness; Microbiome; Critically endangered; Lemur; Primate","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002093418,0.00007091389,0.0001090438,0.00002620963,0.0001159688,0.000007342064,0.00007615257,0.0001715765,0.000008687003],"category_scores_gemma":[0.0001675011,0.00006112544,0.00002936946,0.00006295653,0.0002016708,0.000003988318,0.00006025651,0.00007636437,0.000006014011],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002567142,"about_ca_system_score_gemma":0.0002608982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002900766,"about_ca_topic_score_gemma":0.007147335,"domain_scores_codex":[0.9992092,0.0001469822,0.0001789367,0.0002322768,0.00002594714,0.0002066331],"domain_scores_gemma":[0.9996278,0.0000349166,0.00004865009,0.0001723007,0.00006853792,0.00004785134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008673705,0.00009066125,0.3105223,0.00003495098,0.000007951521,0.000002377239,0.00005150391,8.135668e-7,0.6869041,0.001803482,0.0003928316,0.0001022445],"study_design_scores_gemma":[0.0004503221,0.0002330118,0.9818218,0.00000779569,0.000007654207,0.00005281577,0.0001754558,0.00001009931,0.01406443,0.0007386477,0.002365862,0.00007214348],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966627,0.002334952,0.0001612545,0.0004811214,0.0001210362,0.00009725555,0.0000178633,0.000003347817,0.0001204699],"genre_scores_gemma":[0.9986368,0.0002299786,0.0005394177,0.0002334815,0.00004620945,0.00001254785,0.00007650197,0.000005605702,0.0002194456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6728397,"threshold_uncertainty_score":0.398838,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006874225621765703,"score_gpt":0.25770804655835,"score_spread":0.2508338209365843,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}