{"id":"W4200334692","doi":"10.3390/microorganisms10010005","title":"What Flips the Switch? Signals and Stress Regulating Extraintestinal Pathogenic Escherichia coli Type 1 Fimbriae (Pili)","year":2021,"lang":"en","type":"review","venue":"Microorganisms","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Institut National de la Recherche Scientifique; Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fimbria; Pilus; Microbiology; Colonization; Biology; Escherichia coli; Virulence; Phase variation; Fimbriae Proteins; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006432121,0.0006451103,0.001069752,0.0000495634,0.000397493,0.0004361019,0.0006329229,0.0004311996,0.000107136],"category_scores_gemma":[0.0007604904,0.000469216,0.0003242338,0.0004133894,0.000321851,0.00001138975,0.001190452,0.0006090698,0.00002378121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005299031,"about_ca_system_score_gemma":0.0007043358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001273226,"about_ca_topic_score_gemma":0.00006343931,"domain_scores_codex":[0.9969306,0.0006090015,0.0005772084,0.0009496546,0.000290984,0.0006425356],"domain_scores_gemma":[0.9981307,0.0002149995,0.0003232749,0.0008480625,0.0003250429,0.0001578892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002349872,0.0001178997,0.00005391398,0.004729383,0.001022251,0.00007950322,0.0002560274,0.000002240933,0.6690934,0.00005097529,0.004085569,0.3204854],"study_design_scores_gemma":[0.0002653693,0.0002732537,0.00004724721,0.005532891,0.0005205254,0.0002049016,0.000727956,0.000007112385,0.008499824,0.0000211658,0.9831164,0.0007832986],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.007259773,0.9912062,0.00005863012,0.0001041786,0.0003710934,0.0007795311,0.00009413845,0.0000258844,0.0001005265],"genre_scores_gemma":[0.0003927905,0.9946635,0.001065647,0.0001686698,0.0005947504,0.00009550268,0.0004389283,0.0001389028,0.002441311],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9790309,"threshold_uncertainty_score":0.9997759,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03815479237534057,"score_gpt":0.319559293775582,"score_spread":0.2814045014002414,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}