{"id":"W4200367325","doi":"10.1128/spectrum.01831-21","title":"Fourier Transform Infrared Spectroscopy for Typing Burkholderia cenocepacia ET12 Isolates","year":2021,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Typing; Burkholderia cenocepacia; Genotyping; Multilocus sequence typing; False positive paradox; Strain (injury)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002855845,0.0007217223,0.0003827051,0.00163955,0.0003794754,0.001121694,0.0005487049,0.0009593607,0.00073029],"category_scores_gemma":[0.00385754,0.0002861892,0.0003504797,0.001185448,0.0002976189,0.0008404116,0.0005183094,0.0006471888,0.0005252408],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002420712,"about_ca_system_score_gemma":0.0004084962,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001668605,"about_ca_topic_score_gemma":0.003123956,"domain_scores_codex":[0.9973756,0.0009708344,0.0002002406,0.0003903512,0.0008679809,0.0001950161],"domain_scores_gemma":[0.9986098,0.0005148479,0.0002521907,0.0001176339,0.000404815,0.0001007365],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000905818,0.0003931206,0.04329377,0.0002212681,0.00004316068,0.0001488787,0.0002547237,0.0007014531,0.9194512,0.0001393137,0.0002246566,0.03422257],"study_design_scores_gemma":[0.0000590096,0.003046654,0.1929369,0.0001847582,0.0002457829,0.002458921,0.0009805204,0.02810176,0.7661337,0.0004207406,0.005292528,0.0001387216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9664741,0.001921524,0.02854443,0.0003027713,0.00008752156,0.0001472975,0.0006489338,0.0001559039,0.001717457],"genre_scores_gemma":[0.8848373,0.001721148,0.1112477,0.0001405469,0.0000393474,0.0001167625,0.0007808717,0.00005319856,0.001063142],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002855845,"threshold_uncertainty_score":0.0151034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01324476913904988,"score_gpt":0.2922777323942614,"score_spread":0.2790329632552115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}