{"id":"W4200373771","doi":"10.1093/gbe/evab270","title":"Whole-Genome Sequencing Highlights Conservative Genomic Strategies of a Stress-Tolerant, Long-Lived Scleractinian Coral, <i>Porites australiensis</i> Vaughan, 1918","year":2021,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Coral and Marine Ecosystems Studies","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Okinawa Institute of Science and Technology Graduate University; University of Tokyo; University of the Ryukyus; Canon Foundation in Europe","keywords":"Porites; Biology; Coral; Acropora; Anthozoa; Genome; Evolutionary biology; Coral reef; Reef; Ecology; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001698414,0.0002167814,0.0003736914,0.00003755148,0.0003052,0.00002499101,0.0001146868,0.0001343833,0.000200308],"category_scores_gemma":[0.00002846885,0.0001930585,0.0000645814,0.0002066432,0.0004211084,0.00023245,0.0002927585,0.0001348839,0.00007893566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001947227,"about_ca_system_score_gemma":0.00007771124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001649975,"about_ca_topic_score_gemma":0.00247098,"domain_scores_codex":[0.9985616,0.0001371805,0.0003824589,0.0004713679,0.0000882586,0.0003591899],"domain_scores_gemma":[0.999348,0.00007022705,0.0002248408,0.0001952896,0.00007854224,0.00008310185],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004303408,0.00004927642,0.216112,0.00004777418,0.00007974605,0.00002299499,0.000800259,0.0001674129,0.7819408,0.0005554847,0.00008239777,0.00009879077],"study_design_scores_gemma":[0.0004018972,0.0001875626,0.9878607,0.00002787121,0.00004958534,0.00005521781,0.002441747,0.00006972816,0.002373603,0.001267608,0.005010561,0.0002539108],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996233,0.001251915,0.0002286109,0.0006712464,0.0002247175,0.0001924519,0.0002056043,0.00003494208,0.0009574956],"genre_scores_gemma":[0.9980999,0.0003121638,0.0003785528,0.00006202015,0.0000945344,0.00001550593,0.0002186174,0.000009245546,0.0008094512],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7795672,"threshold_uncertainty_score":0.7872697,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02510481261985935,"score_gpt":0.2428361876320457,"score_spread":0.2177313750121863,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}