{"id":"W4200411527","doi":"10.1002/cpz1.325","title":"Automated Quantification of Subcellular Particles in Myogenic Progenitors","year":2021,"lang":"en","type":"article","venue":"Current Protocols","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Canadian Association of Occupational Therapists; McGill University","funders":"","keywords":"Subcellular localization; Cell biology; Ribonucleoprotein; Fluorescence microscope; Immunofluorescence; Immunocytochemistry; Biology; Cytoplasm; Protein subcellular localization prediction; Stress granule; Messenger RNA; Microscopy; Chemistry; Biophysics; RNA; Biochemistry; Fluorescence; Translation (biology); Pathology; Antibody; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001561494,0.0006549747,0.0005585058,0.002123502,0.0007453884,0.00115854,0.00102183,0.0008013154,0.003291191],"category_scores_gemma":[0.001283401,0.0008149846,0.0004472672,0.0009535167,0.0003626744,0.0006208346,0.001070332,0.001251476,0.0022686],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00087529,"about_ca_system_score_gemma":0.0008809076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00099543,"about_ca_topic_score_gemma":0.001928092,"domain_scores_codex":[0.9988869,0.0001054084,0.00009111271,0.0002542203,0.0005738452,0.00008860724],"domain_scores_gemma":[0.9990838,0.000227503,0.0001546222,0.0001581925,0.0003084946,0.00006753288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001143937,0.0000369858,0.001634761,0.0002580945,0.00002754319,0.00005867078,0.0001064529,0.0008748212,0.9601773,0.001737718,0.001387829,0.0335854],"study_design_scores_gemma":[0.00001856486,0.00008796812,0.01073946,0.0000917103,0.00004047269,0.0003029835,0.00004495076,0.01179307,0.9574986,0.0007761616,0.01856697,0.00003907502],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2560123,0.003385022,0.714969,0.0002636174,0.0001319198,0.0007920821,0.007967136,0.009033288,0.007445703],"genre_scores_gemma":[0.1864528,0.002500128,0.7866901,0.0001467138,0.00003220254,0.002163438,0.01163113,0.002101247,0.008282164],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.003291191,"threshold_uncertainty_score":0.01101011,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04129098570462149,"score_gpt":0.355662545251238,"score_spread":0.3143715595466165,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}