{"id":"W4200538266","doi":"10.1099/ijsem.0.005148","title":"Leptospira ainlahdjerensis sp. nov., Leptospira ainazelensis sp. nov., Leptospira abararensis sp. nov. and Leptospira chreensis sp. nov., four new species isolated from water sources in Algeria","year":2021,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Leptospirosis research and findings","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Institut Pasteur","keywords":"Leptospira; Biology; Subclade; Microbiology; Taxonomy (biology); Phylogenetic tree; Whole genome sequencing; Strain (injury); Botany; Genome; Clade; Serotype; Genetics; Gene; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00130656,0.001128018,0.002697759,0.00112778,0.0005198959,0.000322634,0.001241613,0.001245383,0.002486408],"category_scores_gemma":[0.0008775608,0.000904381,0.0007590168,0.0005434026,0.001203635,0.0008563996,0.001028856,0.001580443,0.0006579418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006305103,"about_ca_system_score_gemma":0.0006603952,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001429456,"about_ca_topic_score_gemma":0.0003955325,"domain_scores_codex":[0.9919466,0.001031814,0.003609834,0.001371901,0.0004566014,0.001583241],"domain_scores_gemma":[0.9945165,0.0009108533,0.001596882,0.000713904,0.001899988,0.0003619086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001184712,0.0005766096,0.1029846,0.001074441,0.00384595,0.0007268715,0.002137551,0.00009212292,0.8727474,0.000355364,0.01348927,0.0007850878],"study_design_scores_gemma":[0.05300054,0.005522188,0.4132772,0.02959231,0.0035299,0.05971635,0.02251762,0.0004884027,0.2777984,0.005014473,0.1204999,0.009042691],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9691153,0.02009116,0.0008819489,0.005426452,0.002770313,0.0008086833,0.000528959,0.00007768886,0.0002995013],"genre_scores_gemma":[0.9909033,0.001998006,0.001425097,0.001125498,0.0007340442,0.00002538985,0.0008003791,0.0001080777,0.002880273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.594949,"threshold_uncertainty_score":0.9993407,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02039958362902089,"score_gpt":0.2321915074953082,"score_spread":0.2117919238662873,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}