{"id":"W4200580587","doi":"10.21203/rs.3.rs-1091120/v1","title":"Genome and Transcriptome Sequencing of Novel Pseudomonas sp. NLX-4 Strain Involved in Bio-Restoration of Over Exploited Mining Sites","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Lakehead University","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions","keywords":"Transcriptome; Strain (injury); Genome; Biology; Computational biology; Whole genome sequencing; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001976601,0.000465426,0.0006144134,0.0005234742,0.0005170142,0.0006345795,0.0002407884,0.0007114927,0.001298053],"category_scores_gemma":[0.0002834958,0.0002064331,0.000621585,0.0009230975,0.0002301685,0.0003247013,0.0004911274,0.0009531539,0.0006273025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002426825,"about_ca_system_score_gemma":0.0005472192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002354486,"about_ca_topic_score_gemma":0.002419093,"domain_scores_codex":[0.9997199,0.00002003356,0.00001851697,0.000094334,0.00008972272,0.00005746067],"domain_scores_gemma":[0.9998273,0.0000456712,0.00002847356,0.00002006868,0.00004124499,0.00003726655],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002891403,0.000101826,0.002491798,0.0001318766,0.00001794078,0.0004107461,0.0001818136,0.0002091205,0.990797,0.00007100692,0.0003660268,0.004931704],"study_design_scores_gemma":[0.0001137951,0.001143307,0.4349465,0.000151151,0.0004057726,0.004697698,0.003146052,0.005769257,0.5235669,0.0008879161,0.02507791,0.00009378039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9725159,0.0004673806,0.00300382,0.0003709065,0.0001053241,0.00008800102,0.02062439,0.0001213677,0.002702972],"genre_scores_gemma":[0.9256288,0.0009378074,0.01232764,0.0002774388,0.00005530793,0.0002683895,0.05090539,0.0001547728,0.009444519],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002354486,"threshold_uncertainty_score":0.004681587,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1145349368434285,"score_gpt":0.3492716169444747,"score_spread":0.2347366801010462,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}