{"id":"W4200582827","doi":"10.1128/msphere.00956-21","title":"Population Dynamics of Escherichia coli Causing Bloodstream Infections over Extended Time Periods","year":2021,"lang":"en","type":"article","venue":"mSphere","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Escherichia coli; Population; Cephalosporin; Microbiology; Bloodstream infection; Biology; Medicine; Antibiotics; Environmental health; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006730796,0.000162433,0.0002405855,0.0007760082,0.0002862244,0.000652301,0.0002504959,0.0003836228,0.0009542434],"category_scores_gemma":[0.002324325,0.0001231076,0.0002093399,0.0008864301,0.0002385319,0.0005866083,0.0005361108,0.0003126712,0.0002516576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005983277,"about_ca_system_score_gemma":0.0004414052,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01410518,"about_ca_topic_score_gemma":0.01190718,"domain_scores_codex":[0.9995118,0.00008850353,0.00002718306,0.0001802537,0.00009162348,0.0001006282],"domain_scores_gemma":[0.9987254,0.0001367231,0.0004761362,0.00007965782,0.0004023316,0.000179888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001062321,0.00004079974,0.9848396,0.00002228472,0.00006813708,0.00009589872,0.0006405549,0.0002565529,0.00285001,0.00009491652,0.0003748083,0.01061014],"study_design_scores_gemma":[0.000002680563,0.0000837525,0.9979169,0.00001060714,0.00001485262,0.0001081164,0.0004794776,0.0003476411,0.0002407383,0.00006352903,0.0007243376,0.00000729601],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979427,0.0006883092,0.0002746236,0.0001220794,0.000006494364,0.000005390125,0.0004452103,0.000006161402,0.000508876],"genre_scores_gemma":[0.9982634,0.0005456237,0.0002354246,0.00006035252,0.00001433257,0.00001230042,0.00052972,0.000002456466,0.0003364494],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01410518,"threshold_uncertainty_score":0.02804613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004788479132515467,"score_gpt":0.2409276877090066,"score_spread":0.2361392085764911,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}