{"id":"W4200596937","doi":"10.1101/2021.12.13.472347","title":"Molecular Epidemiology and Microbiological Characteristics of <i>Cryptococcus gattii</i> VGII isolates from China","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Virulence; Multilocus sequence typing; Biology; Cryptococcosis; Outbreak; Microbiology; Phylogenetic tree; Typing; Cryptococcus; Pathogen; Molecular epidemiology; Virology; Genotype; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000260875,0.0003619499,0.0002470722,0.001253804,0.0004973671,0.0004475295,0.000203635,0.0002811189,0.0003628069],"category_scores_gemma":[0.0004160594,0.0001544522,0.0003146017,0.001345329,0.0002877388,0.0001693213,0.0002441059,0.0001622504,0.00007882014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004382939,"about_ca_system_score_gemma":0.0005812883,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02440293,"about_ca_topic_score_gemma":0.01662986,"domain_scores_codex":[0.9996638,0.00003043851,0.00006183077,0.0000886066,0.00007307198,0.00008218962],"domain_scores_gemma":[0.9995697,0.00003777792,0.0001552037,0.00002476256,0.000109928,0.0001025232],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002797424,0.00007511701,0.8376913,0.0001386009,0.00004541812,0.001560441,0.0007683143,0.0003882416,0.1496939,0.00008133347,0.0001917191,0.009085874],"study_design_scores_gemma":[0.00000811226,0.0001872644,0.9884964,0.00001637089,0.00003481403,0.001744674,0.0007507844,0.0005257232,0.007441266,0.00002736554,0.0007568114,0.00001048774],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992028,0.000118098,0.0001491173,0.00002368618,0.000003731584,0.00001541667,0.0002105233,0.00000262326,0.0002740471],"genre_scores_gemma":[0.9988413,0.0001069432,0.0002842434,0.00003161608,0.000005195495,0.00000783419,0.0005228028,0.000001495729,0.0001984842],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02440293,"threshold_uncertainty_score":0.04852176,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01678889287747305,"score_gpt":0.2451816523253168,"score_spread":0.2283927594478437,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}