{"id":"W4205504650","doi":"10.1101/2022.01.14.476419","title":"Population genomic evidence of selection on structural variants in a natural hybrid zone","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"University of Utah; National Science Foundation","keywords":"Introgression; Biology; Reproductive isolation; Hybrid zone; Evolutionary biology; Genetics; Hybrid; Genetic algorithm; Genome; Structural variation; Natural selection; Selection (genetic algorithm); Population; Genetic variation; Gene flow; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005023206,0.0001880971,0.0002183967,0.001385105,0.000417572,0.0004200403,0.0003601321,0.0003950884,0.001582368],"category_scores_gemma":[0.0007623422,0.0001635508,0.0002903618,0.0005306668,0.0007981966,0.0001645331,0.0006141022,0.0003611933,0.0001042513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002353666,"about_ca_system_score_gemma":0.0001211003,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001462168,"about_ca_topic_score_gemma":0.002980757,"domain_scores_codex":[0.9995401,0.00009823444,0.00003205002,0.0002090795,0.00007648711,0.00004408925],"domain_scores_gemma":[0.9991455,0.000354118,0.0002165884,0.00009180537,0.00006197442,0.0001301288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005064236,0.00007817301,0.5265344,0.00006939543,0.0004482461,0.0004468679,0.0008700066,0.0006745078,0.4624982,0.000838255,0.00009115622,0.006944492],"study_design_scores_gemma":[0.00002090854,0.0001259013,0.9938123,0.000006331587,0.00006330902,0.0004322561,0.000293599,0.000979077,0.003702674,0.0002479421,0.0003031605,0.00001245357],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999308,0.00003189739,0.0003808638,0.000006460842,9.484174e-7,0.000002142165,0.00005410237,0.000007323419,0.0002082967],"genre_scores_gemma":[0.9996418,0.00001087786,0.0001983924,0.00001231133,0.000001372754,0.000002524564,0.00009223826,0.000002707849,0.00003767123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001582368,"threshold_uncertainty_score":0.005293489,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01245595616080607,"score_gpt":0.2318067290237135,"score_spread":0.2193507728629075,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}