{"id":"W4206023599","doi":"10.1080/21505594.2021.2006890","title":"Versatile lifestyles of <i>Edwardsiella</i>: Free-living, pathogen, and core bacterium of the aquatic resistome","year":2021,"lang":"en","type":"article","venue":"Virulence","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Trinity Western University; Western University","funders":"National Natural Science Foundation of China; Li Ka Shing Foundation","keywords":"Edwardsiella tarda; Resistome; Biology; rpoS; Microbiology; Edwardsiella ictaluri; Plasmid; Microbiome; Horizontal gene transfer; Pathogen; Bacteria; Ecology; Gene; Mobile genetic elements; Genetics; Fish <Actinopterygii>; Phylogenetics; Gene expression; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001732464,0.0002753983,0.0001702783,0.0002291193,0.0003457895,0.0007095493,0.0001754072,0.0002925171,0.001714472],"category_scores_gemma":[0.0002492634,0.0001030507,0.0001428668,0.0001354335,0.0003834383,0.0005295181,0.0008122448,0.0004134526,0.0004971424],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002104446,"about_ca_system_score_gemma":0.000247251,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009212862,"about_ca_topic_score_gemma":0.001828297,"domain_scores_codex":[0.9998341,0.00002491034,0.000009140873,0.00003632618,0.00003344364,0.0000620421],"domain_scores_gemma":[0.9998506,0.00001712416,0.00004673877,0.00001414996,0.0000246507,0.00004667223],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008801605,0.00003060982,0.008138975,0.00005729302,0.000007553276,0.0002047094,0.0004197457,0.00005918588,0.9844049,0.0006827247,0.0002932484,0.005613073],"study_design_scores_gemma":[0.00004154119,0.001431083,0.3740524,0.000169521,0.00006848665,0.005983246,0.008984026,0.002389978,0.5500938,0.005373897,0.05123069,0.0001813907],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933707,0.0002599536,0.001471202,0.0003407491,0.00001819905,0.00001199911,0.0001861437,0.00003937849,0.004301522],"genre_scores_gemma":[0.994503,0.0002625091,0.002260049,0.0002275261,0.00001196227,0.00001823231,0.0003257763,0.00002298379,0.002367992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001714472,"threshold_uncertainty_score":0.005735457,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009124797062516156,"score_gpt":0.2033475531395366,"score_spread":0.1942227560770205,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}