{"id":"W4206230785","doi":"10.3390/microorganisms10010071","title":"Characterizing the Alteration in Rumen Microbiome and Carbohydrate-Active Enzymes Profile with Forage of Muskoxen Rumen through Comparative Metatranscriptomics","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; China Scholarship Council","keywords":"Biology; Rumen; Ruminococcus; Fibrobacter succinogenes; Botany; Methanogenesis; Firmicutes; Food science; Fermentation; Bacteria; Biochemistry; Gut flora; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002437327,0.0004118349,0.0004336499,0.0006615004,0.000407522,0.0004257876,0.0001394523,0.0003554678,0.0005747911],"category_scores_gemma":[0.0001666782,0.0001996002,0.000429127,0.0005340814,0.0002027127,0.0003236493,0.0003512167,0.0003357583,0.0001238666],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001758944,"about_ca_system_score_gemma":0.0001951878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001950256,"about_ca_topic_score_gemma":0.00426984,"domain_scores_codex":[0.9998431,0.00001833135,0.000009655086,0.00007058631,0.00002945642,0.00002879528],"domain_scores_gemma":[0.9999121,0.00001303023,0.00002780548,0.0000060756,0.00002459954,0.00001641046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003773452,0.00004476732,0.04352254,0.0002013743,0.0001073951,0.0001295908,0.0003972492,0.00009772487,0.9493644,0.00004950855,0.00004467422,0.005663547],"study_design_scores_gemma":[0.0000104221,0.0006077722,0.9551644,0.0000515644,0.0001776633,0.0003947181,0.0008967112,0.0007044853,0.03912626,0.0001042698,0.002738562,0.00002324163],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974105,0.000928771,0.0005099817,0.00001577326,0.000005815155,0.00001195473,0.0008622392,0.000007384652,0.0002475493],"genre_scores_gemma":[0.9907869,0.00103112,0.003633115,0.0001176054,0.00001372812,0.00006033808,0.003070341,0.00001611979,0.001270775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001950256,"threshold_uncertainty_score":0.003877819,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02152532876222889,"score_gpt":0.2243649996404792,"score_spread":0.2028396708782502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}