{"id":"W4206365198","doi":"10.3390/v14010144","title":"Antigenicity of the Mu (B.1.621) and A.2.5 SARS-CoV-2 Spikes","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de Santé Publique du Québec; University of Ottawa; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Antigenicity; Spike (software development); Receptor; Mutation; Neutralization; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); Biology; Spike Protein; Molecular biology; Virus; Antibody; Genetics; Gene; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002791146,0.0001030173,0.0002151402,0.00009878571,0.0001954579,0.00001382478,0.000213434,0.00002943108,0.00003197864],"category_scores_gemma":[0.0001640494,0.00007140085,0.00009012396,0.000354551,0.0002026218,0.00005283832,0.0003695,0.0002549177,0.00001443231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003976971,"about_ca_system_score_gemma":0.0001693648,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009709138,"about_ca_topic_score_gemma":0.00008402291,"domain_scores_codex":[0.9988255,0.00009366167,0.0001836405,0.0002122181,0.0004708882,0.0002140932],"domain_scores_gemma":[0.9993825,0.0001012266,0.00006199387,0.0003915253,0.00004852981,0.00001423505],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001465009,0.0001095585,0.2575864,0.0000522961,0.00002818583,0.00001548666,0.0002269326,1.807569e-7,0.7386211,0.0002276193,0.001800888,0.001184869],"study_design_scores_gemma":[0.0005042882,0.0001398192,0.02708925,0.00001543608,0.00002543178,0.0000270895,0.0001670544,0.0000287843,0.706571,0.0001392934,0.265231,0.0000615778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956698,0.001217511,0.000007540916,0.0002853003,0.0001292866,0.000273022,0.00003396935,0.00003448311,0.002349091],"genre_scores_gemma":[0.9417602,0.00001013037,0.00003169704,0.05806904,0.00006257669,0.00002339683,3.897075e-7,0.00001626617,0.00002625967],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2634301,"threshold_uncertainty_score":0.2911642,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08320500184451174,"score_gpt":0.3673783111267784,"score_spread":0.2841733092822667,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}