{"id":"W4206426913","doi":"10.1139/gen-2021-0047","title":"An endogenous retrovirus presumed to have been endogenized or relocated recently in a marsupial, the red-necked wallaby","year":2022,"lang":"en","type":"article","venue":"Genome","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science","keywords":"Biology; Provirus; Endogenous retrovirus; Genetics; Retrotransposon; Marsupial; Genome; Retrovirus; Virus; genomic DNA; Virology; Molecular biology; Gene; Transposable element; Zoology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007120426,0.0001898376,0.0001336693,0.0003166325,0.0003548456,0.000337541,0.0001865284,0.0003861378,0.0004129794],"category_scores_gemma":[0.0001825556,0.0001319134,0.000173125,0.0001578925,0.0003421801,0.0002481584,0.0002946336,0.0004567628,0.0001563839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000292917,"about_ca_system_score_gemma":0.000155259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007491519,"about_ca_topic_score_gemma":0.00103748,"domain_scores_codex":[0.9999373,0.000005471086,0.000003870091,0.00002779549,0.00001089985,0.00001472774],"domain_scores_gemma":[0.9999107,0.00001414363,0.00003609168,0.00001081701,0.000007408574,0.00002076837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006774074,0.00001114202,0.007554798,0.00002982405,0.000009020097,0.000892267,0.0002055774,0.00006684683,0.9881406,0.0003332538,0.00001760482,0.002671191],"study_design_scores_gemma":[0.00005661668,0.00160542,0.4340304,0.0001241828,0.0001716558,0.02389496,0.001937734,0.004150514,0.5093969,0.0006095225,0.02396268,0.00005951904],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987935,0.0002260601,0.0006932686,0.00001844884,0.000008356894,0.000004926732,0.00004756924,0.000008470308,0.0001994374],"genre_scores_gemma":[0.9955188,0.0002215196,0.00212771,0.00003999519,0.000008233874,0.000009254963,0.000428836,0.00001025982,0.0016355],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007491519,"threshold_uncertainty_score":0.002125263,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03081365910180691,"score_gpt":0.2494248088650896,"score_spread":0.2186111497632827,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}