{"id":"W4206501035","doi":"10.1093/molbev/msac002","title":"Duplication and Specialization of <i>NUDX1</i> in <i>Rosaceae</i> Led to Geraniol Production in Rose Petals","year":2022,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill Genome Centre","funders":"Centre National de la Recherche Scientifique; U.S. Department of Agriculture; National Institute of Food and Agriculture; Agence Nationale de la Recherche; National Science Foundation","keywords":"Biology; Rose (mathematics); Petal; Geraniol; Rosaceae; Gene duplication; Botany; Horticulture; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003141914,0.00008706535,0.0001219187,0.0001409027,0.0000561921,0.000003454032,0.0000583625,0.00007878709,0.000004066146],"category_scores_gemma":[0.00007912872,0.00009669057,0.00001784404,0.0002550158,0.00004142833,0.000004705494,0.0001104541,0.00006283002,3.011529e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002610873,"about_ca_system_score_gemma":0.00003396616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006051323,"about_ca_topic_score_gemma":0.00008136165,"domain_scores_codex":[0.9991902,0.0001097984,0.0001853219,0.0003291794,0.00005090911,0.0001345557],"domain_scores_gemma":[0.9997385,0.000003685443,0.00006567224,0.000132052,0.00003070139,0.00002941134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001353841,0.00006128344,0.008444464,0.00001590935,0.00000444869,7.672532e-7,0.0000745455,0.0004131401,0.9882202,0.00180473,0.00001136309,0.0008137524],"study_design_scores_gemma":[0.0005904031,0.0004343287,0.01652286,0.00001314266,0.000009182672,0.00003546218,0.000119977,0.0002537945,0.9752778,0.004950885,0.001630291,0.000161875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842184,0.0005833858,0.01439,0.0003014772,0.00009403059,0.0003329011,0.00001542482,0.000004714958,0.00005964373],"genre_scores_gemma":[0.999191,0.0001552061,0.0002221229,0.0001599583,0.00002669647,0.0001033132,0.0001054281,0.000008008452,0.00002829932],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01497254,"threshold_uncertainty_score":0.3942927,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003797749593640722,"score_gpt":0.2391026321094984,"score_spread":0.2353048825158577,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}