{"id":"W4206507425","doi":"10.1101/2022.01.08.475489","title":"Toxoflavin secreted by <i>Pseudomonas alcaliphila</i> inhibits growth of <i>Legionella pneumophila</i> and its host <i>Vermamoeba vermiformis</i>","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Polytechnique Montréal; Institut National de la Recherche Scientifique; McGill University","funders":"","keywords":"Legionella pneumophila; Microbiology; Biology; Legionella; Pseudomonas; Pseudomonas aeruginosa; Bacteria; Biofilm; Agar; 16S ribosomal RNA; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001005287,0.0009096557,0.0009540595,0.0002597432,0.0003295877,0.0001446813,0.001157474,0.0009260449,0.00002446619],"category_scores_gemma":[0.000269303,0.0009876535,0.0003522403,0.0005896799,0.0003299726,0.00003197741,0.002708213,0.001169532,0.00001633135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001167322,"about_ca_system_score_gemma":0.0007488857,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000888199,"about_ca_topic_score_gemma":0.000002412234,"domain_scores_codex":[0.9948818,0.0003710216,0.001033041,0.001813181,0.000958381,0.000942582],"domain_scores_gemma":[0.9964091,0.00006226396,0.0007321544,0.001500816,0.0007415087,0.0005542284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001751594,0.0002103198,0.003289133,0.0005971505,0.0002186616,0.00004662214,0.000009664802,0.00001021527,0.9792948,0.0001872629,0.01596041,6.381006e-7],"study_design_scores_gemma":[0.001218514,0.0002776522,0.002490798,0.0001619035,0.0001018574,4.123146e-7,0.000006153733,0.00008572696,0.9638397,0.000002493588,0.03076388,0.001050984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881756,0.00734838,0.00005640771,0.0006290223,0.0005715613,0.00107806,0.00193023,0.0001161364,0.00009455839],"genre_scores_gemma":[0.9913595,0.006597387,0.0001623423,0.0008225276,0.0004851767,0.000243314,0.0000305773,0.0002286379,0.00007056478],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01545514,"threshold_uncertainty_score":0.9992574,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009330777777103134,"score_gpt":0.2210694524523892,"score_spread":0.211738674675286,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}