{"id":"W4206705069","doi":"10.1002/chem.202104481","title":"Structure‐ and Interaction‐Based Design of Anti‐SARS‐CoV‐2 Aptamers","year":2022,"lang":"en","type":"article","venue":"Chemistry - A European Journal","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"H2020 Marie Skłodowska-Curie Actions; Russian Academy of Sciences; Russian Foundation for Basic Research; Horizon 2020 Framework Programme; Grand Équipement National De Calcul Intensif; Canadian Institutes of Health Research; China Scholarship Council; Russian Science Foundation; Ministry of Education and Science of the Russian Federation; Office of Science; Partnership for Advanced Computing in Europe AISBL; Argonne National Laboratory; European Commission; U.S. Department of Energy","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Aptamer; 2019-20 coronavirus outbreak; Computational biology; Sars virus; Virology; Computer science; Biology; Medicine; Genetics; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003356377,0.0001358118,0.0001412705,0.00003727258,0.0001964925,0.0000269699,0.000187008,0.0000253414,0.00002361379],"category_scores_gemma":[0.00005619586,0.0001259016,0.00009006744,0.00009340302,0.0001116066,0.000003876933,0.0001325497,0.0002775455,2.309701e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001974614,"about_ca_system_score_gemma":0.00004701464,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":4.894633e-7,"about_ca_topic_score_gemma":6.110918e-8,"domain_scores_codex":[0.9990761,0.0001653182,0.0002510655,0.0002199465,0.0001432629,0.0001443629],"domain_scores_gemma":[0.9993901,0.000009375479,0.00026655,0.0002034566,0.00007325969,0.00005727028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000836683,0.00003171632,0.0001171218,0.00001131576,0.00005150186,0.0000332602,0.00001288829,0.0003642415,0.9958451,2.292976e-7,0.001355208,0.002093797],"study_design_scores_gemma":[0.0003343342,0.000162483,0.00007549482,0.00001282195,0.00003511378,0.0006237823,0.0001211708,0.0008732261,0.9894658,0.00001165237,0.008135269,0.0001489027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908328,0.0001453849,0.008592753,0.00008095757,0.00005169038,0.0000407716,0.00002713052,0.00001475982,0.0002137491],"genre_scores_gemma":[0.9931937,0.00006368487,0.006293041,0.0001607269,0.0001266628,6.453826e-7,0.00003830777,0.00002337256,0.00009989586],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006780061,"threshold_uncertainty_score":0.5134119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0173390168404133,"score_gpt":0.2641987730584682,"score_spread":0.2468597562180549,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}