{"id":"W4206823168","doi":"10.3410/f.13409119.14782195","title":"Faculty Opinions recommendation of Comprehensive genome-wide protein-DNA interactions detected at single-nucleotide resolution.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institutes of Health; Pennsylvania State University; University of Pennsylvania","keywords":"False positive paradox; Computational biology; Chromatin immunoprecipitation; Genetics; DNA; Exonuclease; Biology; Computer science; Gene; DNA polymerase; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001382535,0.001905871,0.001209544,0.003710571,0.0005097572,0.001739291,0.001976959,0.001447029,0.04970837],"category_scores_gemma":[0.006728705,0.0005924778,0.0009290193,0.006522187,0.0002432716,0.0009413101,0.001192915,0.001635507,0.05560121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009855485,"about_ca_system_score_gemma":0.003089326,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01658241,"about_ca_topic_score_gemma":0.03762953,"domain_scores_codex":[0.9987914,0.0001530263,0.0001434639,0.0003676842,0.0003931737,0.0001513254],"domain_scores_gemma":[0.9963686,0.0008171183,0.0005137165,0.00072762,0.0009794771,0.0005934733],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001652517,0.00006742976,0.005376243,0.001343005,0.0001709842,0.00006247031,0.00003401106,0.0007516736,0.00102976,0.0005562292,0.9794072,0.01103579],"study_design_scores_gemma":[0.0002824989,0.00003361613,0.01931428,0.0002217355,0.00009670451,0.0001076885,0.00007511829,0.001601828,0.001935657,0.0008606118,0.9754295,0.00004075823],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0003668387,0.00004451763,0.0001560728,0.00005479764,0.00001550836,0.00001198192,0.9982083,0.0003843463,0.0007575855],"genre_scores_gemma":[0.0004406755,0.00002743852,0.0003052955,0.00001827875,0.000003068723,0.00002110548,0.9988023,0.00003553508,0.0003462495],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.04970837,"threshold_uncertainty_score":0.1662911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02843672012682394,"score_gpt":0.2999013516639804,"score_spread":0.2714646315371564,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}