{"id":"W4206825260","doi":"10.1101/2022.01.05.475171","title":"The diversity and functional capacity of microbes associated with coastal phototrophs","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Marine and coastal plant biology","field":"Earth and Planetary Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Argonne National Laboratory; University of Chicago; National Science Foundation","keywords":"Phototroph; Biology; Zostera marina; Macrophyte; Ecology; Metagenomics; Seagrass; Ecosystem; Botany; Photosynthesis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001087833,0.0003921777,0.0002213322,0.001153031,0.0003374934,0.0006699973,0.0001576527,0.00034546,0.000619188],"category_scores_gemma":[0.0003269185,0.0001658431,0.0002699567,0.0009564288,0.0002242277,0.0003554024,0.0006665044,0.0001974569,0.0002015769],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001464737,"about_ca_system_score_gemma":0.000182578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002878488,"about_ca_topic_score_gemma":0.003160674,"domain_scores_codex":[0.9998226,0.00001021091,0.00001824692,0.00007175482,0.00003424819,0.00004308869],"domain_scores_gemma":[0.9997433,0.00003350445,0.00009843899,0.00001552391,0.00005582927,0.00005341521],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001956967,0.00003594557,0.2050761,0.0001548277,0.00008718349,0.0001432247,0.0004829529,0.0002745543,0.7873632,0.00007002991,0.00008973884,0.006026585],"study_design_scores_gemma":[0.00000506097,0.0001218343,0.9820192,0.00001607224,0.00004900484,0.0003551399,0.0007511618,0.000538813,0.01523931,0.00005686228,0.0008350976,0.00001224256],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982262,0.0001756445,0.0001425715,0.00001407726,0.000001888069,0.000005180474,0.001155552,0.000005334822,0.0002734293],"genre_scores_gemma":[0.9967942,0.0001773431,0.0006596658,0.00002979664,0.000003749643,0.00001464892,0.001998065,0.000003957144,0.000318598],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002878488,"threshold_uncertainty_score":0.005723476,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01514948106642402,"score_gpt":0.1615372476695177,"score_spread":0.1463877666030937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}