{"id":"W4206945255","doi":"10.1371/journal.ppat.1010257","title":"Turnip mosaic virus co-opts the vacuolar sorting receptor VSR4 to promote viral genome replication in plants by targeting viral replication vesicles to the endosome","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"K. C. Wong Magna Fund in Ningbo University; Northeast Agricultural University; Chinese University of Hong Kong; Nanjing Agricultural University; Ningbo University; National Natural Science Foundation of China; Atara Biotherapeutics","keywords":"Turnip mosaic virus; Endosome; Biology; Viral replication; Vacuolar protein sorting; Cell biology; Virology; TSG101; Viral entry; Golgi apparatus; Viral protein; ESCRT; Virus; Potyvirus; Plant virus; Gene; Genetics; Intracellular; Endoplasmic reticulum; Microvesicles; microRNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000122435,0.0004915649,0.0002216022,0.0003240158,0.0001690269,0.0003520226,0.0002726374,0.0003462576,0.001439706],"category_scores_gemma":[0.0000715692,0.0002056028,0.0003244618,0.0001583012,0.0002203526,0.0002004522,0.0003650272,0.0007514739,0.0006357711],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007365583,"about_ca_system_score_gemma":0.0002635397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008685179,"about_ca_topic_score_gemma":0.001512265,"domain_scores_codex":[0.9998389,0.00002454078,0.00001114805,0.00003218339,0.00004772673,0.00004546774],"domain_scores_gemma":[0.9999313,0.00001043524,0.00001853893,0.00000942537,0.000005861221,0.00002441889],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004294571,0.000006939003,0.00005812023,0.00001657899,0.00000405324,0.00002702834,0.00000416618,0.0000402145,0.9992971,0.00007488043,0.00003003726,0.00039784],"study_design_scores_gemma":[0.0000169311,0.00008958741,0.002984354,0.000003882466,0.00001854025,0.0002518466,0.00002363103,0.001693945,0.9912349,0.00007522951,0.003600568,0.000006556452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914602,0.002002923,0.003145049,0.0002214945,0.00006786001,0.00002529082,0.0003189272,0.0002975587,0.002460783],"genre_scores_gemma":[0.9918118,0.0006664321,0.002495881,0.00009243202,0.00001175338,0.00002158075,0.0004567322,0.00006390476,0.004379593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001439706,"threshold_uncertainty_score":0.005344152,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03548035100956345,"score_gpt":0.26592471844341,"score_spread":0.2304443674338465,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}