{"id":"W4206982323","doi":"10.1101/2022.01.21.477286","title":"Metatranscriptomics reveals a shift in microbial community composition and function during summer months in a coastal marine environment","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Tula Foundation; University of British Columbia; Fisheries and Oceans Canada","funders":"Research and Development; Gordon and Betty Moore Foundation","keywords":"Abiotic component; Ecology; Biology; Temperate climate; Upwelling; Microbial population biology; Plankton; Oceanography; Environmental science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001061238,0.0002659852,0.0002582501,0.0005882496,0.0003602001,0.0004166085,0.0001306372,0.0002518162,0.0003644742],"category_scores_gemma":[0.0001766749,0.0001529874,0.0002025031,0.0006065781,0.0001442747,0.0001611916,0.0002538692,0.0001883391,0.0001230447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004741889,"about_ca_system_score_gemma":0.0004275279,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04054157,"about_ca_topic_score_gemma":0.09885733,"domain_scores_codex":[0.99989,0.000006190067,0.000006548584,0.00004168407,0.00002478451,0.00003074318],"domain_scores_gemma":[0.9998529,0.00001244137,0.00004042067,0.000008624782,0.00005349561,0.00003204019],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003023318,0.00003695579,0.2140487,0.00004806173,0.00003577938,0.0001133749,0.0004560938,0.0001719659,0.7791956,0.00001962117,0.0001004438,0.005471074],"study_design_scores_gemma":[0.00000123888,0.00006167512,0.9935809,0.000003055699,0.00001129961,0.00004769785,0.0003467661,0.0002247952,0.0055155,0.000009063732,0.0001942165,0.000003693294],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988673,0.00006132622,0.0001073872,0.000009482492,0.000001520117,0.000005803866,0.0007795601,0.000005125152,0.0001625723],"genre_scores_gemma":[0.9972991,0.0001198371,0.0005609387,0.00002848831,0.00000235469,0.00001527917,0.001417931,0.000004313949,0.0005517651],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04054157,"threshold_uncertainty_score":0.08061123,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01220026606604876,"score_gpt":0.1996127644816614,"score_spread":0.1874124984156126,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}