{"id":"W4210258454","doi":"10.3389/fpls.2022.814718","title":"Transposable Elements: Distribution, Polymorphism, and Climate Adaptation in Populus","year":2022,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Higher Education Discipline Innovation Project; National Natural Science Foundation of China","keywords":"Biology; Transposable element; Genetics; Gene; Untranslated region; Genome; Phenotype; Populus trichocarpa; Messenger RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004356807,0.00005547462,0.00007553164,0.00002887409,0.0004031475,0.00003070655,0.0001846432,0.00001370075,0.00007054857],"category_scores_gemma":[0.00001554133,0.00002863162,0.00001135036,0.0008484973,0.00007929651,0.0001370049,0.00006316258,0.00007276951,8.996317e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008990326,"about_ca_system_score_gemma":0.00001824043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002624778,"about_ca_topic_score_gemma":0.00109241,"domain_scores_codex":[0.9990837,0.00003626716,0.0001625383,0.0002342294,0.0002244633,0.000258793],"domain_scores_gemma":[0.9998626,0.00001704582,0.00003861315,0.0000266534,0.000009449542,0.000045663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004206229,0.00010409,0.9684184,0.000002658336,0.000001225012,0.00001076706,0.0005234961,0.000593156,0.009959552,0.001433263,0.0003627944,0.01854855],"study_design_scores_gemma":[0.0003391252,0.0001543604,0.9501595,0.00001106859,0.000003540885,0.00001783191,0.00264938,0.03608963,0.0002371556,0.00196074,0.00820454,0.0001731071],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976604,0.0001603751,0.00004397508,0.0007369851,0.0002923553,0.0001325544,0.0008623765,0.00001175157,0.00009922981],"genre_scores_gemma":[0.9990088,0.00006439298,0.0005244365,0.00007218647,0.00001391285,0.00002716036,0.0002689184,2.462612e-7,0.00001999773],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03549647,"threshold_uncertainty_score":0.3100725,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01054197824771152,"score_gpt":0.1919168650130278,"score_spread":0.1813748867653163,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}